Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g008660.1.1 | Tomato | cytosol | 60.45 | 81.68 |
| AT4G20370.1 | Thale cress | cytosol | 72.88 | 73.71 |
| PGSC0003DMT400041726 | Potato | cytosol | 71.19 | 72.41 |
| PGSC0003DMT400060057 | Potato | cytosol | 70.62 | 72.25 |
| Bra004117.1-P | Field mustard | cytosol | 71.19 | 72.0 |
| CDY07452 | Canola | cytosol | 71.19 | 72.0 |
| CDY60941 | Canola | cytosol | 70.06 | 70.86 |
| CDY16409 | Canola | cytosol | 70.06 | 70.86 |
| Bra022475.1-P | Field mustard | cytosol | 70.06 | 70.86 |
| Bra015710.1-P | Field mustard | mitochondrion | 61.02 | 70.13 |
| CDY02016 | Canola | cytosol | 67.23 | 68.0 |
| KRH06761 | Soybean | cytosol | 67.23 | 68.0 |
| KRG94768 | Soybean | cytosol | 67.23 | 68.0 |
| CDX87561 | Canola | cytosol | 67.8 | 67.8 |
| KRH46899 | Soybean | cytosol | 65.54 | 66.29 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 42.94 | 65.52 |
| KRH01790 | Soybean | cytosol | 64.97 | 65.34 |
| Zm00001d017134_P001 | Maize | cytosol | 63.84 | 64.94 |
| KRH01791 | Soybean | cytosol | 63.28 | 64.74 |
| EES07110 | Sorghum | cytosol | 63.28 | 64.37 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 62.71 | 63.79 |
| OQU83339 | Sorghum | cytosol | 62.71 | 62.71 |
| Zm00001d025737_P001 | Maize | cytosol | 61.58 | 62.29 |
| Zm00001d004630_P001 | Maize | cytosol | 62.15 | 62.15 |
| EES11032 | Sorghum | cytosol | 61.02 | 62.07 |
| GSMUA_Achr3P21510_001 | Banana | cytosol | 60.45 | 61.85 |
| GSMUA_Achr10P... | Banana | cytosol | 61.58 | 61.58 |
| Os04t0488400-01 | Rice | cytosol | 60.45 | 61.49 |
| KRH46900 | Soybean | cytosol | 30.51 | 61.36 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 63.84 | 61.08 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 59.89 | 60.92 |
| KXG35998 | Sorghum | cytosol | 60.45 | 60.11 |
| TraesCS6D01G197100.1 | Wheat | cytosol | 58.76 | 59.77 |
| TraesCS6B01G244400.1 | Wheat | cytosol | 58.76 | 59.77 |
| TraesCS6A01G214400.1 | Wheat | cytosol | 58.76 | 59.77 |
| GSMUA_Achr1P17050_001 | Banana | cytosol | 58.19 | 59.54 |
| Os11t0293800-00 | Rice | cytosol | 63.84 | 59.47 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 59.89 | 59.22 |
| TraesCS2D01G345700.1 | Wheat | cytosol | 58.19 | 59.2 |
| TraesCS2B01G365300.1 | Wheat | cytosol | 58.19 | 59.2 |
| TraesCS2A01G347000.1 | Wheat | cytosol | 58.19 | 59.2 |
| TraesCS4D01G072300.1 | Wheat | cytosol | 59.32 | 58.66 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 57.63 | 58.62 |
| TraesCS5B01G296600.1 | Wheat | cytosol | 58.76 | 58.43 |
| Zm00001d024023_P001 | Maize | cytosol | 57.63 | 58.29 |
| TraesCS4B01G073800.1 | Wheat | cytosol | 58.76 | 58.1 |
| HORVU4Hr1G012200.2 | Barley | cytosol | 58.76 | 58.1 |
| TraesCS5D01G304400.1 | Wheat | cytosol | 58.19 | 57.87 |
| Os12t0232300-00 | Rice | cytosol | 57.63 | 57.63 |
| EES16923 | Sorghum | cytosol | 57.63 | 57.63 |
| AT1G65480.2 | Thale cress | cytosol | 71.19 | 57.53 |
| TraesCS2D01G538000.1 | Wheat | cytosol | 49.15 | 57.24 |
| CDY13571 | Canola | cytosol | 64.97 | 56.93 |
| TraesCS2B01G511400.1 | Wheat | cytosol | 54.8 | 56.4 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 56.5 | 56.18 |
| TraesCS2A01G485000.1 | Wheat | cytosol | 54.24 | 56.14 |
| Zm00001d003226_P001 | Maize | cytosol | 49.15 | 56.13 |
| TraesCS2B01G567200.1 | Wheat | cytosol | 54.8 | 56.07 |
| TraesCS2D01G485100.1 | Wheat | cytosol | 54.8 | 56.07 |
| TraesCS5B01G020300.1 | Wheat | cytosol | 55.37 | 56.0 |
| TraesCS3D01G011600.1 | Wheat | cytosol | 55.37 | 56.0 |
| TraesCS5D01G159500.1 | Wheat | cytosol | 55.93 | 55.62 |
| TraesCS5B01G152800.1 | Wheat | cytosol | 55.93 | 55.62 |
| TraesCS2B01G567400.1 | Wheat | cytosol | 54.24 | 55.49 |
| TraesCS3A01G013100.1 | Wheat | cytosol | 54.8 | 55.43 |
| PGSC0003DMT400018307 | Potato | cytosol | 46.33 | 55.41 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 53.67 | 55.23 |
| TraesCS5A01G154600.1 | Wheat | cytosol | 55.37 | 55.06 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 53.67 | 54.91 |
| TraesCS2D01G538100.1 | Wheat | cytosol | 53.67 | 54.91 |
| TraesCS2A01G536600.1 | Wheat | cytosol | 53.67 | 54.91 |
| TraesCS2A01G536700.1 | Wheat | cytosol | 53.67 | 54.91 |
| TraesCS2A01G536900.1 | Wheat | cytosol | 53.67 | 54.91 |
| TraesCS3D01G011500.1 | Wheat | cytosol | 54.24 | 54.86 |
| TraesCS3D01G011700.1 | Wheat | cytosol | 54.24 | 54.86 |
| TraesCS3B01G015800.1 | Wheat | cytosol | 53.67 | 54.29 |
| TraesCS3B01G015200.1 | Wheat | cytosol | 53.67 | 54.29 |
| HORVU3Hr1G002020.1 | Barley | cytosol | 53.11 | 54.02 |
| KRH01789 | Soybean | cytosol | 40.68 | 53.73 |
| TraesCS3B01G015600.2 | Wheat | cytosol | 53.11 | 53.71 |
| PGSC0003DMT400037143 | Potato | cytosol | 53.11 | 53.71 |
| Os09t0513500-00 | Rice | cytosol, extracellular | 30.51 | 53.47 |
| TraesCSU01G045800.1 | Wheat | cytosol | 52.54 | 53.14 |
| TraesCS3B01G015700.1 | Wheat | cytosol | 52.54 | 53.14 |
| PGSC0003DMT400030575 | Potato | cytosol | 50.28 | 50.86 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 37.29 | 50.0 |
| TraesCS5A01G297300.1 | Wheat | cytosol | 57.63 | 50.0 |
| PGSC0003DMT400090526 | Potato | cytosol | 47.46 | 48.84 |
| Zm00001d006116_P001 | Maize | cytosol | 59.89 | 48.62 |
| PGSC0003DMT400030582 | Potato | cytosol | 23.16 | 46.07 |
| PGSC0003DMT400014409 | Potato | cytosol | 44.63 | 45.66 |
| CDY65847 | Canola | cytosol | 25.42 | 31.69 |
Protein Annotations
| EntrezGene:102605989 | MapMan:27.8.1 | Gene3D:3.90.280.10 | InterPro:FT | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0008429 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0048573 | InterPro:IPR036610 | UniProt:M1BBV5 |
| InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | EnsemblPlantsGene:PGSC0003DMG400016179 | PGSC:PGSC0003DMG400016179 |
| EnsemblPlants:PGSC0003DMT400041725 | ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF21 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 |
| UniParc:UPI0002952C8D | RefSeq:XP_006353262.1 | : | : | : | : |
Description
Flowering locus T [Source:PGSC_GENE;Acc:PGSC0003DMG400016179]
Coordinates
chr11:+:3239883..3242809
Molecular Weight (calculated)
19838.5 Da
IEP (calculated)
7.436
GRAVY (calculated)
-0.304
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIRGRDTL ELGGVISDVL DPFTRSISLS VVYNHREVIN GTNLRPSQIT NQPRVEIGGN GLSTFYTLIV VDPDAPSPSN PNLREYLHWL VTDIPATTGV
101: TFGNEVICYE SPRPSMGIHR IVFSLFRQLG RETVYAPNWR QNFNTRQFAE LYNLGSPVAA VYFNCQRENG TGGRRCE
101: TFGNEVICYE SPRPSMGIHR IVFSLFRQLG RETVYAPNWR QNFNTRQFAE LYNLGSPVAA VYFNCQRENG TGGRRCE
001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.