Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G007370.1 | |
| HORVU4Hr1G031770.1 | |
| HORVU4Hr1G043300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | HORVU4Hr1G007370.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G031770.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G043300.1 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G015800.1 | Wheat | cytosol | 90.23 | 89.71 |
| TraesCS3D01G011700.1 | Wheat | cytosol | 88.51 | 88.0 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 85.06 | 86.05 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 62.07 | 81.82 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 79.89 | 80.35 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 71.84 | 70.22 |
| Zm00001d024023_P001 | Maize | cytosol | 68.97 | 68.57 |
| EES16923 | Sorghum | cytosol | 68.39 | 67.23 |
| GSMUA_Achr10P... | Banana | cytosol | 61.49 | 60.45 |
| HORVU4Hr1G012200.2 | Barley | cytosol | 61.49 | 59.78 |
| PGSC0003DMT400060057 | Potato | cytosol | 59.2 | 59.54 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 59.2 | 59.2 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 59.2 | 59.2 |
| Bra015710.1-P | Field mustard | mitochondrion | 51.72 | 58.44 |
| KRG94768 | Soybean | cytosol | 58.62 | 58.29 |
| CDX87561 | Canola | cytosol | 59.2 | 58.19 |
| KRH06761 | Soybean | cytosol | 58.05 | 57.71 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 60.92 | 57.3 |
| AT4G20370.1 | Thale cress | cytosol | 57.47 | 57.14 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 58.62 | 56.98 |
| PGSC0003DMT400041726 | Potato | cytosol | 56.9 | 56.9 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 56.9 | 56.9 |
| Solyc11g008640.1.1 | Tomato | cytosol | 56.9 | 56.9 |
| HORVU3Hr1G027590.13 | Barley | cytosol | 58.05 | 56.42 |
| CDY02016 | Canola | cytosol | 56.32 | 56.0 |
| KRH46899 | Soybean | cytosol | 56.32 | 56.0 |
| HORVU3Hr1G087100.1 | Barley | cytosol | 57.47 | 55.87 |
| HORVU7Hr1G024610.1 | Barley | cytosol | 57.47 | 55.87 |
| Bra022475.1-P | Field mustard | cytosol | 55.75 | 55.43 |
| CDY60941 | Canola | cytosol | 55.75 | 55.43 |
| CDY16409 | Canola | cytosol | 55.75 | 55.43 |
| Solyc05g055660.1.1 | Tomato | cytosol | 44.25 | 55.0 |
| Bra004117.1-P | Field mustard | cytosol | 55.17 | 54.86 |
| CDY07452 | Canola | cytosol | 55.17 | 54.86 |
| Solyc05g053850.2.1 | Tomato | cytosol | 55.17 | 54.86 |
| PGSC0003DMT400041725 | Potato | cytosol | 54.02 | 53.11 |
| KRH01791 | Soybean | cytosol | 51.72 | 52.02 |
| KRH46900 | Soybean | cytosol | 24.71 | 48.86 |
| KRH01790 | Soybean | cytosol | 49.43 | 48.86 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 48.85 | 48.57 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 31.61 | 47.41 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 46.55 | 46.82 |
| AT1G65480.2 | Thale cress | cytosol | 58.62 | 46.58 |
| HORVU1Hr1G076430.1 | Barley | cytosol | 47.7 | 46.11 |
| HORVU4Hr1G090390.1 | Barley | cytosol, nucleus, peroxisome | 46.55 | 45.76 |
| CDY13571 | Canola | cytosol | 52.87 | 45.54 |
| KRH01789 | Soybean | cytosol | 35.06 | 45.52 |
| HORVU2Hr1G023180.2 | Barley | cytosol | 45.98 | 43.01 |
| Solyc11g008660.1.1 | Tomato | cytosol | 31.61 | 41.98 |
| HORVU3Hr1G001000.2 | Barley | cytosol | 45.4 | 40.93 |
| HORVU7Hr1G046660.6 | Barley | cytosol | 42.53 | 40.66 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 39.08 | 33.5 |
| CDY65847 | Canola | cytosol | 24.71 | 30.28 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G002020.1 | EnsemblPlantsGene:HORVU3Hr1G002020 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 | SUPFAM:SSF49777 | UniParc:UPI000B480680 |
| UniProt:A0A287JWW5 | MapMan:27.8.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:4119371..4120362
Molecular Weight (calculated)
19380.9 Da
IEP (calculated)
5.696
GRAVY (calculated)
-0.279
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: PGSRDPLIIG RIVGDIVDYF DASAQLRVLY GNREIMVGSE LRPSQVVNQP TVHITGRAGS LYTLVMVDPD VPTPSDPCER EYLHWFVTDI PEGGDVSRGT
101: EVVAYEQPQP TAGIHRLAFV VFRQTAREAI YAPGWRSNFV TRDMAECYNL GAPVAAAYFN SQREGSCGGR RWYR
101: EVVAYEQPQP TAGIHRLAFV VFRQTAREAI YAPGWRSNFV TRDMAECYNL GAPVAAAYFN SQREGSCGGR RWYR
001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
Arabidopsis Description
MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.