Factsheet for Solyc05g055660.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g061990.2.1
Solyc02g063070.2.1
Solyc02g083520.2.1
Solyc03g034180.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20370.1	Solyc02g061990.2.1	AT4G35900.1	19656342
AT4G20370.1	Solyc02g083520.2.1	AT4G35900.1	19656342
AT4G20370.1	Solyc02g063070.2.1	AT5G38480.1	23613197
AT4G20370.1	Solyc03g034180.2.1	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060057	Potato	cytosol	90.71	73.41
KRH46900	Soybean	cytosol	41.43	65.91
Solyc03g063100.1.1	Tomato	cytosol	75.71	59.89
Bra022475.1-P	Field mustard	cytosol	72.86	58.29
KRH06761	Soybean	cytosol	72.86	58.29
CDY16409	Canola	cytosol	72.86	58.29
CDY60941	Canola	cytosol	72.86	58.29
Solyc11g008660.1.1	Tomato	cytosol	53.57	57.25
Bra004117.1-P	Field mustard	cytosol	71.43	57.14
CDY07452	Canola	cytosol	71.43	57.14
AT4G20370.1	Thale cress	cytosol	70.71	56.57
KRG94768	Soybean	cytosol	70.71	56.57
Solyc05g053850.2.1	Tomato	cytosol	69.29	55.43
CDX87561	Canola	cytosol	68.57	54.24
Solyc11g008640.1.1	Tomato	cytosol	67.14	54.02
CDY02016	Canola	cytosol	67.14	53.71
Os09t0513500-00	Rice	cytosol, extracellular	38.57	53.47
GSMUA_Achr9P07900_001	Banana	cytosol	66.43	53.45
Bra015710.1-P	Field mustard	mitochondrion	58.57	53.25
HORVU4Hr1G089690.1	Barley	cytosol	50.0	53.03
KRH01790	Soybean	cytosol	66.43	52.84
KRH01791	Soybean	cytosol	63.57	51.45
OQU83339	Sorghum	cytosol	65.0	51.41
EES07110	Sorghum	cytosol	63.57	51.15
EES11032	Sorghum	cytosol	63.57	51.15
Zm00001d017134_P001	Maize	cytosol	63.57	51.15
Zm00001d025737_P001	Maize	cytosol	63.57	50.86
Zm00001d004630_P001	Maize	cytosol	64.29	50.85
GSMUA_Achr2P05870_001	Banana	cytosol	67.14	50.81
TraesCS6D01G197100.1	Wheat	cytosol	62.86	50.57
TraesCS6A01G214400.1	Wheat	cytosol	62.86	50.57
TraesCS6B01G244400.1	Wheat	cytosol	62.86	50.57
GSMUA_Achr2P20900_001	Banana	cytosol	62.86	50.57
GSMUA_Achr3P21510_001	Banana	cytosol	62.14	50.29
KRH46899	Soybean	cytosol	62.86	50.29
GSMUA_Achr1P17050_001	Banana	cytosol	61.43	49.71
TraesCS4D01G072300.1	Wheat	cytosol	62.86	49.16
GSMUA_Achr10P...	Banana	cytosol	62.14	49.15
HORVU4Hr1G012200.2	Barley	cytosol	62.14	48.6
TraesCS4B01G073800.1	Wheat	cytosol	62.14	48.6
Os11t0293800-00	Rice	cytosol	65.71	48.42
Os04t0488400-01	Rice	cytosol	59.29	47.7
GSMUA_Achr3P02730_001	Banana	cytosol	60.71	47.49
AT1G65480.2	Thale cress	cytosol	73.57	47.03
KXG35998	Sorghum	cytosol	59.29	46.63
Solyc03g026050.2.1	Tomato	cytosol	57.86	46.29
TraesCS2D01G485100.1	Wheat	cytosol	57.14	46.24
TraesCS5D01G304400.1	Wheat	cytosol	58.57	46.07
TraesCS5B01G296600.1	Wheat	cytosol	58.57	46.07
TraesCS2D01G345700.1	Wheat	cytosol	57.14	45.98
TraesCS2B01G365300.1	Wheat	cytosol	57.14	45.98
TraesCS2A01G347000.1	Wheat	cytosol	57.14	45.98
TraesCS3D01G011700.1	Wheat	cytosol	57.14	45.71
CDY39282	Canola	cytosol, mitochondrion, nucleus	37.86	45.69
TraesCS2B01G567200.1	Wheat	cytosol	56.43	45.66
TraesCS2B01G567400.1	Wheat	cytosol	56.43	45.66
TraesCS2A01G485000.1	Wheat	cytosol	55.71	45.61
TraesCS2B01G511400.1	Wheat	cytosol	55.71	45.35
Os12t0232300-00	Rice	cytosol	57.14	45.2
HORVU2Hr1G117710.1	Barley	cytosol	55.71	45.09
TraesCS2A01G536600.1	Wheat	cytosol	55.71	45.09
TraesCS2A01G536700.1	Wheat	cytosol	55.71	45.09
TraesCS2A01G536900.1	Wheat	cytosol	55.71	45.09
TraesCS2D01G538100.1	Wheat	cytosol	55.71	45.09
HORVU2Hr1G084540.1	Barley	cytosol	55.71	44.83
HORVU2Hr1G108520.1	Barley	cytosol	55.0	44.77
Zm00001d024023_P001	Maize	cytosol	55.71	44.57
TraesCS3D01G011500.1	Wheat	cytosol	55.71	44.57
HORVU3Hr1G002020.1	Barley	cytosol	55.0	44.25
TraesCS2D01G538000.1	Wheat	cytosol	47.86	44.08
CDY13571	Canola	cytosol	63.57	44.06
TraesCS3D01G011600.1	Wheat	cytosol	55.0	44.0
TraesCS3A01G013100.1	Wheat	cytosol	55.0	44.0
TraesCS5B01G020300.1	Wheat	cytosol	55.0	44.0
Solyc09g009560.1.1	Tomato	cytosol	53.57	43.6
EES16923	Sorghum	cytosol	55.0	43.5
TraesCS3B01G015200.1	Wheat	cytosol	54.29	43.43
Solyc06g074350.2.1	Tomato	cytosol	54.29	43.43
TraesCS3B01G015600.2	Wheat	cytosol	53.57	42.86
TraesCS3B01G015800.1	Wheat	cytosol	53.57	42.86
TraesCS5B01G152800.1	Wheat	cytosol	54.29	42.7
TraesCS5D01G159500.1	Wheat	cytosol	54.29	42.7
Zm00001d003226_P001	Maize	cytosol	47.14	42.58
Solyc01g009560.1.1	Tomato	cytosol	52.86	42.29
TraesCS5A01G154600.1	Wheat	cytosol	53.57	42.13
Solyc03g119100.1.1	Tomato	cytosol	51.43	41.62
HORVU5Hr1G048110.1	Barley	cytosol	52.86	41.57
TraesCSU01G045800.1	Wheat	cytosol	51.43	41.14
TraesCS3B01G015700.1	Wheat	cytosol	51.43	41.14
TraesCS5A01G297300.1	Wheat	cytosol	57.86	39.71
KRH01789	Soybean	cytosol	37.14	38.81
Solyc02g079290.2.1	Tomato	cytosol	47.86	37.64
Zm00001d006116_P001	Maize	cytosol	57.86	37.16
Solyc11g008650.1.1	Tomato	mitochondrion	18.57	35.62
Solyc01g009580.1.1	Tomato	plastid	55.0	34.68
CDY65847	Canola	cytosol	30.0	29.58

Protein Annotations

EnsemblPlants:Solyc05g055660.1.1	EnsemblPlantsGene:Solyc05g055660.1	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF76	PFAM:PF01161	ProteinID:AAO31794.1
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0000006012	UniProt:Q84XK8	MapMan:27.8.1	:

Description

SP6A [Source:UniProtKB/TrEMBL;Acc:Q84XK8]

Coordinates

chr5:-:65218757..65220707

Molecular Weight (calculated)

16062.4 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.172

Length

140 amino acids

Sequence
(BLAST)

001: MPRVDPLIVG RVIGEVLDPF TRSVDLRVVY NNREVNNACV LKPSQVVMQP KVYIGGDDLR TFYTLIMVDP DAPSPSNPNL REYLHWLVTD IPATTDTRFG
101: NEIVCYENPT PTMGIHRFVL VLFRQLGRET VYPPGWRQNF

Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)

001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.