Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G304400.1 | Wheat | cytosol | 85.29 | 97.75 |
| TraesCS5B01G296600.1 | Wheat | cytosol | 84.8 | 97.19 |
| Os09t0513500-00 | Rice | cytosol, extracellular | 45.59 | 92.08 |
| KXG35998 | Sorghum | cytosol | 76.47 | 87.64 |
| GSMUA_Achr3P21510_001 | Banana | cytosol | 60.29 | 71.1 |
| Zm00001d006116_P001 | Maize | cytosol | 75.0 | 70.18 |
| GSMUA_Achr1P17050_001 | Banana | cytosol | 59.31 | 69.94 |
| TraesCS6A01G214400.1 | Wheat | cytosol | 54.9 | 64.37 |
| AT4G20370.1 | Thale cress | cytosol | 53.43 | 62.29 |
| KRH06761 | Soybean | cytosol | 53.43 | 62.29 |
| TraesCS2A01G347000.1 | Wheat | cytosol | 52.94 | 62.07 |
| CDY60941 | Canola | cytosol | 52.94 | 61.71 |
| Bra022475.1-P | Field mustard | cytosol | 52.94 | 61.71 |
| CDY16409 | Canola | cytosol | 52.45 | 61.14 |
| Bra004117.1-P | Field mustard | cytosol | 51.96 | 60.57 |
| KRG94768 | Soybean | cytosol | 51.96 | 60.57 |
| CDY07452 | Canola | cytosol | 51.96 | 60.57 |
| CDY02016 | Canola | cytosol | 51.47 | 60.0 |
| Bra015710.1-P | Field mustard | mitochondrion | 44.61 | 59.09 |
| CDX87561 | Canola | cytosol | 50.98 | 58.76 |
| PGSC0003DMT400060057 | Potato | cytosol | 49.51 | 58.38 |
| TraesCS7A01G115400.1 | Wheat | cytosol | 50.0 | 57.95 |
| Solyc05g055660.1.1 | Tomato | cytosol | 39.71 | 57.86 |
| TraesCS3A01G013100.1 | Wheat | cytosol | 49.51 | 57.71 |
| PGSC0003DMT400041725 | Potato | cytosol | 50.0 | 57.63 |
| PGSC0003DMT400041726 | Potato | cytosol | 49.02 | 57.47 |
| TraesCS2A01G485000.1 | Wheat | cytosol | 48.04 | 57.31 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 32.35 | 56.9 |
| Solyc11g008640.1.1 | Tomato | cytosol | 48.53 | 56.9 |
| TraesCS3A01G143100.1 | Wheat | cytosol, mitochondrion | 50.49 | 56.59 |
| TraesCS5A01G154600.1 | Wheat | cytosol | 49.02 | 56.18 |
| KRH01790 | Soybean | cytosol | 47.55 | 55.11 |
| TraesCS2A01G536900.1 | Wheat | cytosol | 46.57 | 54.91 |
| TraesCS2A01G536600.1 | Wheat | cytosol | 46.57 | 54.91 |
| TraesCS2A01G536700.1 | Wheat | cytosol | 46.57 | 54.91 |
| Solyc05g053850.2.1 | Tomato | cytosol | 47.06 | 54.86 |
| TraesCS2A01G132300.1 | Wheat | cytosol | 46.08 | 54.34 |
| KRH46899 | Soybean | cytosol | 46.57 | 54.29 |
| KRH01791 | Soybean | cytosol | 45.1 | 53.18 |
| AT1G65480.2 | Thale cress | cytosol | 54.9 | 51.14 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 43.14 | 50.87 |
| TraesCS6A01G160200.1 | Wheat | cytosol | 45.59 | 50.82 |
| TraesCS5A01G546900.1 | Wheat | cytosol | 44.12 | 50.56 |
| TraesCS5A01G546800.1 | Wheat | cytosol | 44.61 | 50.0 |
| TraesCS1A01G338600.1 | Wheat | cytosol | 44.12 | 50.0 |
| TraesCS3A01G006600.1 | Wheat | cytosol | 42.65 | 49.71 |
| CDY13571 | Canola | cytosol | 49.02 | 49.51 |
| KRH01789 | Soybean | cytosol | 31.86 | 48.51 |
| TraesCS7A01G355100.1 | Wheat | cytosol | 23.04 | 47.47 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 40.2 | 46.86 |
| KRH46900 | Soybean | cytosol | 20.1 | 46.59 |
| Solyc11g008660.1.1 | Tomato | cytosol | 29.9 | 46.56 |
| TraesCS7A01G229400.1 | Wheat | cytosol, golgi | 38.73 | 43.89 |
| CDY65847 | Canola | cytosol | 21.08 | 30.28 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G297300.1 | EnsemblPlantsGene:TraesCS5A01G297300 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF40 | PFAM:PF01161 | ScanProsite:PS01220 |
| SUPFAM:SSF49777 | TIGR:cd00866 | MapMan:27.8.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:505018900..505023557
Molecular Weight (calculated)
22728.2 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.303
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGRDPLAL SQVIGDVLDP FIKSAAMIIN YGEKEITNGT GVRSSAVLNA PQVQIEGRDR TKLYTLVMVD PDAPSPSKPE YREYLHCPLK KGGGCFFSIH
101: QQLKNSCSVC YWRLVTDIPE ATDARFGNEI VPYEAPRPPA GIHRLVFVLF KQEARQTVYA PGWRQNFNIR DFSAFYNLGP PVAALFFNCQ KESGVGGRRF
201: QGPG
101: QQLKNSCSVC YWRLVTDIPE ATDARFGNEI VPYEAPRPPA GIHRLVFVLF KQEARQTVYA PGWRQNFNIR DFSAFYNLGP PVAALFFNCQ KESGVGGRRF
201: QGPG
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.