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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g061990.2.1
Solyc02g063070.2.1
Solyc02g083520.2.1
Solyc03g034180.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G20370.1 Solyc02g061990.2.1 AT4G35900.1 19656342
AT4G20370.1 Solyc02g083520.2.1 AT4G35900.1 19656342
AT4G20370.1 Solyc02g063070.2.1 AT5G38480.1 23613197
AT4G20370.1 Solyc03g034180.2.1 AT5G38480.1 23613197
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g063100.1.1 Tomato cytosol 72.0 71.19
Solyc05g055660.1.1 Tomato cytosol 55.43 69.29
AT4G20370.1 Thale cress cytosol 66.29 66.29
Solyc11g008640.1.1 Tomato cytosol 65.71 66.09
Solyc11g008650.1.1 Tomato mitochondrion 27.43 65.75
Bra022475.1-P Field mustard cytosol 64.57 64.57
KRG94768 Soybean cytosol 64.57 64.57
KRH06761 Soybean cytosol 64.57 64.57
CDY60941 Canola cytosol 64.57 64.57
CDY16409 Canola cytosol 64.57 64.57
CDX87561 Canola cytosol 65.14 64.41
Bra015710.1-P Field mustard mitochondrion 56.0 63.64
CDY07452 Canola cytosol 63.43 63.43
CDY02016 Canola cytosol 63.43 63.43
Bra004117.1-P Field mustard cytosol 63.43 63.43
KRH01791 Soybean cytosol 62.29 63.01
OQU83339 Sorghum cytosol 63.43 62.71
EES07110 Sorghum cytosol 62.29 62.64
Zm00001d017134_P001 Maize cytosol 61.71 62.07
KRH01790 Soybean cytosol 62.29 61.93
KRH46899 Soybean cytosol 61.71 61.71
Zm00001d004630_P001 Maize cytosol 62.29 61.58
GSMUA_Achr9P07900_001 Banana cytosol 61.14 61.49
GSMUA_Achr2P20900_001 Banana cytosol 60.57 60.92
Zm00001d024023_P001 Maize cytosol 60.57 60.57
Zm00001d025737_P001 Maize cytosol 60.0 60.0
EES11032 Sorghum cytosol 59.43 59.77
TraesCS6D01G197100.1 Wheat cytosol 59.43 59.77
TraesCS6B01G244400.1 Wheat cytosol 59.43 59.77
TraesCS6A01G214400.1 Wheat cytosol 59.43 59.77
Os04t0488400-01 Rice cytosol 59.43 59.77
GSMUA_Achr3P21510_001 Banana cytosol 58.29 58.96
Solyc11g008660.1.1 Tomato cytosol 44.0 58.78
GSMUA_Achr1P17050_001 Banana cytosol 57.71 58.38
EES16923 Sorghum cytosol 58.86 58.19
GSMUA_Achr10P... Banana cytosol 58.86 58.19
TraesCS2B01G511400.1 Wheat cytosol 57.14 58.14
TraesCS2A01G347000.1 Wheat cytosol 57.71 58.05
TraesCS2B01G365300.1 Wheat cytosol 57.71 58.05
TraesCS2D01G345700.1 Wheat cytosol 57.71 58.05
TraesCS2A01G485000.1 Wheat cytosol 56.57 57.89
HORVU2Hr1G108520.1 Barley cytosol 56.57 57.56
GSMUA_Achr3P02730_001 Banana cytosol 58.86 57.54
TraesCS2D01G485100.1 Wheat cytosol 56.57 57.23
TraesCS2B01G567400.1 Wheat cytosol 56.57 57.23
TraesCS2B01G567200.1 Wheat cytosol 56.57 57.23
Os12t0232300-00 Rice cytosol 57.71 57.06
TraesCS4D01G072300.1 Wheat cytosol 58.29 56.98
HORVU2Hr1G084540.1 Barley cytosol 56.57 56.9
Os11t0293800-00 Rice cytosol 61.71 56.84
KRH46900 Soybean cytosol 28.57 56.82
TraesCS2D01G538100.1 Wheat cytosol 56.0 56.65
TraesCS2A01G536900.1 Wheat cytosol 56.0 56.65
TraesCS2A01G536700.1 Wheat cytosol 56.0 56.65
TraesCS2A01G536600.1 Wheat cytosol 56.0 56.65
TraesCS3D01G011600.1 Wheat cytosol 56.57 56.57
HORVU4Hr1G012200.2 Barley cytosol 57.71 56.42
TraesCS4B01G073800.1 Wheat cytosol 57.71 56.42
GSMUA_Achr2P05870_001 Banana cytosol 59.43 56.22
HORVU2Hr1G117710.1 Barley cytosol 55.43 56.07
TraesCS2D01G538000.1 Wheat cytosol 48.57 55.92
TraesCS3D01G011700.1 Wheat cytosol 55.43 55.43
TraesCS3A01G013100.1 Wheat cytosol 55.43 55.43
TraesCS3B01G015200.1 Wheat cytosol 55.43 55.43
CDY39282 Canola cytosol, mitochondrion, nucleus 36.57 55.17
HORVU3Hr1G002020.1 Barley cytosol 54.86 55.17
TraesCSU01G045800.1 Wheat cytosol 54.86 54.86
TraesCS3B01G015600.2 Wheat cytosol 54.86 54.86
TraesCS3B01G015700.1 Wheat cytosol 54.86 54.86
TraesCS3B01G015800.1 Wheat cytosol 54.86 54.86
TraesCS3D01G011500.1 Wheat cytosol 54.86 54.86
KXG35998 Sorghum cytosol 55.43 54.49
TraesCS5D01G304400.1 Wheat cytosol 54.86 53.93
CDY13571 Canola cytosol 61.71 53.47
AT1G65480.2 Thale cress cytosol 66.86 53.42
TraesCS5B01G152800.1 Wheat cytosol 54.29 53.37
TraesCS5B01G296600.1 Wheat cytosol 54.29 53.37
TraesCS5D01G159500.1 Wheat cytosol 54.29 53.37
HORVU5Hr1G048110.1 Barley cytosol 54.29 53.37
HORVU4Hr1G089690.1 Barley cytosol 40.0 53.03
Zm00001d003226_P001 Maize cytosol 46.86 52.9
TraesCS5A01G154600.1 Wheat cytosol 53.71 52.81
TraesCS5B01G020300.1 Wheat cytosol 52.57 52.57
Solyc06g074350.2.1 Tomato cytosol 52.0 52.0
Os09t0513500-00 Rice cytosol, extracellular 29.71 51.49
Solyc03g026050.2.1 Tomato cytosol 51.43 51.43
Solyc09g009560.1.1 Tomato cytosol 49.14 50.0
Solyc01g009560.1.1 Tomato cytosol 49.71 49.71
Solyc03g119100.1.1 Tomato cytosol 48.0 48.55
TraesCS5A01G297300.1 Wheat cytosol 54.86 47.06
KRH01789 Soybean cytosol 36.0 47.01
Zm00001d006116_P001 Maize cytosol 54.86 44.04
Solyc02g079290.2.1 Tomato cytosol 44.57 43.82
Solyc01g009580.1.1 Tomato plastid 50.86 40.09
CDY65847 Canola cytosol 28.57 35.21
Protein Annotations
EnsemblPlants:Solyc05g053850.2.1EnsemblPlantsGene:Solyc05g053850.2Gene3D:3.90.280.10InterPro:IPR036610InterPro:PEBPInterPro:PEBP-like_sf
InterPro:PEBP_eukInterPro:Phosphotidylethanolamine-bd_CSPANTHER:PTHR11362PANTHER:PTHR11362:SF9PFAM:PF01161ProteinID:AAO31793.1
ScanProsite:PS01220SEG:segSUPFAM:SSF49777UniParc:UPI0000006011UniProt:Q84XK9MapMan:27.8.1
Description
SP5G [Source:UniProtKB/TrEMBL;Acc:Q84XK9]
Coordinates
chr5:+:63889954..63891979
Molecular Weight (calculated)
19538.1 Da
IEP (calculated)
5.177
GRAVY (calculated)
-0.199
Length
175 amino acids
Sequence
(BLAST)
001: MPRDPLIVSG VVGDVVDPFT RCVDFGVVYN NRVVYNGCSL RPSQVVNQPR VDIDGDDLRT FYTLIMVDPD APNPSNPNLR EYLHWLVTDI PAATGATFGN
101: EVVGYESPRP SMGIHRYIFV LYRQLGCDAI DAPDIIDSRQ NFNTRDFARF HNLGLPVAAV YFNCNREGGT GGRRL
Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)
001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.