Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0710800-01 | |
| Os11t0546900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | Os03t0710800-01 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | Os11t0546900-01 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11032 | Sorghum | cytosol | 93.68 | 93.68 |
| Zm00001d025737_P001 | Maize | cytosol | 92.53 | 92.0 |
| TraesCS2D01G345700.1 | Wheat | cytosol | 90.23 | 90.23 |
| TraesCS2B01G365300.1 | Wheat | cytosol | 90.23 | 90.23 |
| TraesCS2A01G347000.1 | Wheat | cytosol | 90.23 | 90.23 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 90.23 | 90.23 |
| Zm00001d003226_P001 | Maize | cytosol | 74.14 | 83.23 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 82.18 | 82.18 |
| TraesCS5B01G020300.1 | Wheat | cytosol | 79.89 | 79.43 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 81.61 | 79.33 |
| GSMUA_Achr10P... | Banana | cytosol | 80.46 | 79.1 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 78.74 | 78.74 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 79.89 | 75.14 |
| Os11t0293800-00 | Rice | cytosol | 80.46 | 73.68 |
| Os12t0232300-00 | Rice | cytosol | 71.84 | 70.62 |
| KRH06761 | Soybean | cytosol | 67.24 | 66.86 |
| AT4G20370.1 | Thale cress | cytosol | 67.24 | 66.86 |
| KRG94768 | Soybean | cytosol | 66.67 | 66.29 |
| CDY60941 | Canola | cytosol | 66.09 | 65.71 |
| CDY07452 | Canola | cytosol | 66.09 | 65.71 |
| Bra022475.1-P | Field mustard | cytosol | 66.09 | 65.71 |
| CDY16409 | Canola | cytosol | 66.09 | 65.71 |
| Bra004117.1-P | Field mustard | cytosol | 66.09 | 65.71 |
| PGSC0003DMT400060057 | Potato | cytosol | 64.94 | 65.32 |
| Bra015710.1-P | Field mustard | mitochondrion | 56.9 | 64.29 |
| Os06t0157700-01 | Rice | nucleus | 66.09 | 64.25 |
| CDX87561 | Canola | cytosol | 64.37 | 63.28 |
| KRH01791 | Soybean | cytosol | 62.07 | 62.43 |
| CDY02016 | Canola | cytosol | 62.64 | 62.29 |
| Solyc11g008640.1.1 | Tomato | cytosol | 61.49 | 61.49 |
| Os06t0157500-01 | Rice | nucleus | 62.64 | 61.24 |
| KRH46899 | Soybean | cytosol | 61.49 | 61.14 |
| PGSC0003DMT400041725 | Potato | cytosol | 61.49 | 60.45 |
| KRH01790 | Soybean | cytosol | 60.92 | 60.23 |
| PGSC0003DMT400041726 | Potato | cytosol | 59.77 | 59.77 |
| Solyc05g053850.2.1 | Tomato | cytosol | 59.77 | 59.43 |
| Solyc05g055660.1.1 | Tomato | cytosol | 47.7 | 59.29 |
| KRH46900 | Soybean | cytosol | 29.89 | 59.09 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 39.08 | 58.62 |
| Os09t0513500-00 | Rice | cytosol, extracellular | 33.33 | 57.43 |
| Os06t0552900-00 | Rice | extracellular | 54.6 | 54.91 |
| AT1G65480.2 | Thale cress | cytosol | 68.97 | 54.79 |
| Os11t0152500-00 | Rice | cytosol | 53.45 | 53.76 |
| Os04t0411400-01 | Rice | cytosol | 52.3 | 52.6 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 51.72 | 52.02 |
| CDY13571 | Canola | cytosol | 59.77 | 51.49 |
| Os02t0531600-01 | Rice | cytosol | 51.15 | 51.45 |
| Os05t0518000-00 | Rice | cytosol | 51.15 | 51.15 |
| KRH01789 | Soybean | cytosol | 39.08 | 50.75 |
| Os01t0202700-00 | Rice | cytosol | 49.43 | 48.86 |
| Solyc11g008660.1.1 | Tomato | cytosol | 36.78 | 48.85 |
| Os01t0748800-00 | Rice | cytosol | 23.56 | 45.56 |
| Os06t0498800-01 | Rice | cytosol, extracellular, plastid | 45.98 | 45.45 |
| Os01t0111600-01 | Rice | cytosol | 45.4 | 45.4 |
| Os01t0218500-02 | Rice | cytosol, plastid | 63.79 | 40.22 |
| Os02t0232300-00 | Rice | cytosol | 35.06 | 32.97 |
| CDY65847 | Canola | cytosol | 25.86 | 31.69 |
Protein Annotations
| EMBL:AK068736 | EnsemblPlants:Os04t0488400-01 | EnsemblPlantsGene:Os04g0488400 | EntrezGene:4336228 | Gene3D:3.90.280.10 | InterPro:IPR036610 |
| InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF23 |
| PFAM:PF01161 | ProteinID:BAF15064.1 | ProteinID:BAS89816.1 | ProteinID:CAD41333.2 | ProteinID:EEE61228.1 | RefSeq:XP_015633387.1 |
| ScanProsite:PS01220 | SUPFAM:SSF49777 | UniParc:UPI000004D330 | UniProt:Q7XUF1 | MapMan:27.8.1 | : |
Description
FLOWERING TIME LIKE GENE 6Similar to FLOWERING LOCUS T protein. (Os04t0488400-01)
Coordinates
chr4:-:24391459..24395755
Molecular Weight (calculated)
19649.3 Da
IEP (calculated)
8.638
GRAVY (calculated)
-0.417
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRDPLVVGH VVGDILDPFN KSASLKVLYN NKELTNGSEL KPSQVANEPR IEIAGRDIRN LYTLVMVDPD SPSPSNPTKR EYLHWLVTDI PESANASYGN
101: EVVSYESPKP TAGIHRFVFI LFRQYVQQTI YAPGWRPNFN TRDFSALYNL GPPVAAVFFN CQRENGCGGR RYIR
101: EVVSYESPKP TAGIHRFVFI LFRQYVQQTI YAPGWRPNFN TRDFSALYNL GPPVAAVFFN CQRENGCGGR RYIR
001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.