Factsheet for Os01t0218500-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008939_P001	Maize	cytosol	58.7	93.64
KXG31553	Sorghum	cytosol	58.33	93.06
HORVU3Hr1G027590.13	Barley	cytosol	59.06	91.06
TraesCS3D01G144500.1	Wheat	cytosol	58.33	89.44
TraesCS3A01G143100.1	Wheat	cytosol, mitochondrion	57.97	87.91
KRH70116	Soybean	mitochondrion	18.84	81.25
Os06t0157500-01	Rice	nucleus	51.09	79.21
Os06t0157700-01	Rice	nucleus	51.09	78.77
Solyc11g008650.1.1	Tomato	mitochondrion	20.65	78.08
TraesCS3B01G162000.1	Wheat	cytosol	58.7	75.7
GSMUA_Achr4P08540_001	Banana	cytosol	48.91	75.42
GSMUA_Achr10P...	Banana	cytosol	48.19	75.14
KRH08450	Soybean	cytosol	47.46	74.43
KRH08453	Soybean	cytosol	45.65	71.59
Os12t0232300-00	Rice	cytosol	41.3	64.41
Os04t0488400-01	Rice	cytosol	40.22	63.79
Os11t0293800-00	Rice	cytosol	43.84	63.68
KRH70112	Soybean	cytosol	26.81	63.25
Os06t0552900-00	Rice	extracellular	38.41	61.27
Os01t0202700-00	Rice	cytosol	38.04	59.66
Os05t0518000-00	Rice	cytosol	36.96	58.62
Os11t0152500-00	Rice	cytosol	36.59	58.38
Os12t0152000-00	Rice	cytosol, extracellular	36.23	57.8
Os02t0531600-01	Rice	cytosol	35.87	57.23
Os04t0411400-01	Rice	cytosol	35.87	57.23
Os09t0513500-00	Rice	cytosol, extracellular	20.65	56.44
Os01t0748800-00	Rice	cytosol	18.12	55.56
Os01t0111600-01	Rice	cytosol	31.52	50.0
Os06t0498800-01	Rice	cytosol, extracellular, plastid	31.16	48.86
Os02t0232300-00	Rice	cytosol	26.09	38.92

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	EntrezGene:4324585	EMBL:AK072979	ProteinID:BAD73067.1	ProteinID:BAD81414.1
ProteinID:BAF04325.1	ProteinID:BAS71050.1	InterPro:FT	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0008429	GO:GO:0009628	GO:GO:0009791
GO:GO:0009908	GO:GO:0009909	GO:GO:0010229	GO:GO:0048510	GO:GO:0048572	GO:GO:0048573
InterPro:IPR036610	EnsemblPlantsGene:Os01g0218500	EnsemblPlants:Os01t0218500-02	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk
PFAM:PF01161	ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	UniProt:Q5QNE3
SUPFAM:SSF49777	UniParc:UPI000048DE5F	RefSeq:XP_015611892.1	SEG:seg	:	:

Description

FLOWERING TIME LIKE GENE 1Similar to ZCN14 protein. (Os01t0218500-01);Similar to SP3D. (Os01t0218500-02);Similar to ZCN14 protein. (Os01t0218500-03);Non-protein coding transcript. (Os01t0218500-04)

Coordinates

chr1:+:6494516..6499766

Molecular Weight (calculated)

29854.5 Da

IEP (calculated)

8.703

GRAVY (calculated)

-0.176

Length

276 amino acids

Sequence
(BLAST)

001: MTGSSCPADS SQLLYPRRGA PTTTTTSRPP LHPLIAHAPY DVVLHRSVVL SISSARDQAE LASFWCYIRL GGGASAKRAA GEDDRSRSSL TAARGGGGET
101: MSGRGRGDPL VLGRVVGDVV DPFVRRVALR VAYGAREVAN GCELRPSAVA DQPRVAVGGP DMRTFYTLVM VDPDAPSPSD PNLREYLHWL VTDIPATTGV
201: SFGTEVVCYE SPRPVLGIHR LVFLLFEQLG RQTVYAPGWR QNFSTRDFAE LYNLGLPVAA VYFNCQRESG TGGRRM

Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)

001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.