Factsheet for Os11t0152500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0710800-01
Os11t0546900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Os03t0710800-01	AT5G38480.1	23613197
AT5G03840.1	Os11t0546900-01	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G128600.1	Wheat	cytosol	94.8	94.8
TraesCS5B01G127600.1	Wheat	cytosol	94.8	94.8
TraesCS5D01G136300.1	Wheat	cytosol	94.8	94.8
EES16646	Sorghum	cytosol	94.8	94.8
Os12t0152000-00	Rice	cytosol, extracellular	92.49	92.49
HORVU5Hr1G042230.13	Barley	cytosol	93.06	92.0
Zm00001d023420_P001	Maize	cytosol	91.91	91.91
EES09271	Sorghum	cytosol	91.91	91.91
Zm00001d052537_P001	Maize	cytosol	89.02	87.01
Os04t0411400-01	Rice	cytosol	86.71	86.71
Os02t0531600-01	Rice	cytosol	83.24	83.24
VIT_08s0007g03450.t01	Wine grape	cytosol	82.08	82.56
Zm00001d044705_P001	Maize	extracellular	94.8	79.61
KRG96189	Soybean	cytosol	78.03	78.03
PGSC0003DMT400090526	Potato	cytosol	77.46	77.91
Solyc09g009560.1.1	Tomato	cytosol	76.88	77.33
PGSC0003DMT400018307	Potato	cytosol	65.9	77.03
CDX77127	Canola	cytosol	50.29	75.65
VIT_06s0080g00290.t01	Wine grape	cytosol	75.14	75.14
AT2G27550.1	Thale cress	cytosol	75.14	74.29
CDY30540	Canola	cytosol	74.57	73.71
Bra034357.1-P	Field mustard	cytosol	74.57	73.71
CDY51916	Canola	cytosol	74.57	73.71
CDY27416	Canola	cytosol	74.57	73.71
CDX83272	Canola	cytosol	73.99	73.14
Bra000506.1-P	Field mustard	cytosol	73.99	73.14
Solyc06g074350.2.1	Tomato	cytosol	73.99	73.14
KRH26623	Soybean	cytosol	61.27	72.6
CDY31183	Canola	cytosol	73.41	72.57
CDY04503	Canola	cytosol	73.41	72.57
Bra012010.1-P	Field mustard	cytosol	73.41	72.57
CDX71440	Canola	cytosol	72.83	72.0
KRH32734	Soybean	cytosol	72.25	71.84
KRH30839	Soybean	cytosol	71.68	71.68
CDX80890	Canola	cytosol	71.68	71.26
Bra028815.1-P	Field mustard	cytosol	73.41	70.95
CDY14173	Canola	cytosol	73.41	70.95
CDY04899	Canola	cytosol	73.41	70.95
AT5G03840.1	Thale cress	cytosol	72.25	70.62
Bra005783.1-P	Field mustard	cytosol	72.25	70.62
CDY41432	Canola	cytosol	71.68	69.66
KRG89440	Soybean	cytosol	30.06	69.33
Bra009508.1-P	Field mustard	cytosol	71.1	69.1
CDX70281	Canola	cytosol	71.1	69.1
KRH22689	Soybean	cytosol	62.43	65.06
Os06t0157700-01	Rice	nucleus	63.01	60.89
Os06t0157500-01	Rice	nucleus	58.96	57.3
KRH67905	Soybean	plastid	78.03	55.56
Os04t0488400-01	Rice	cytosol	53.76	53.45
Os05t0518000-00	Rice	cytosol	52.02	51.72
Os01t0202700-00	Rice	cytosol	52.6	51.7
Os06t0552900-00	Rice	extracellular	51.45	51.45
Os01t0111600-01	Rice	cytosol	51.45	51.15
Os06t0498800-01	Rice	cytosol, extracellular, plastid	50.87	50.0
Os09t0513500-00	Rice	cytosol, extracellular	28.32	48.51
Os11t0293800-00	Rice	cytosol	52.6	47.89
Os12t0232300-00	Rice	cytosol	48.55	47.46
Os01t0748800-00	Rice	cytosol	23.7	45.56
Os01t0218500-02	Rice	cytosol, plastid	58.38	36.59
Os02t0232300-00	Rice	cytosol	35.84	33.51

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	EntrezGene:4349798	ProteinID:AAX94844.1	ProteinID:ABA91511.1	ProteinID:BAF27616.1
ProteinID:BAT12726.1	ncoils:Coil	ProteinID:EAZ17463.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003712
GO:GO:0005488	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0008429	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009910	GO:GO:0009987
GO:GO:0010229	GO:GO:0048510	GO:GO:1903506	InterPro:IPR036610	EnsemblPlantsGene:Os11g0152500	EnsemblPlants:Os11t0152500-00
InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161	ScanProsite:PS01220	PANTHER:PTHR11362
PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	UniProt:Q53Q71	SUPFAM:SSF49777	InterPro:TFL1-like	UniParc:UPI000004D32B
RefSeq:XP_015617887.1	:	:	:	:	:

Description

RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 1PEBP family protein. (Os11t0152500-00)

Coordinates

chr11:-:2452773..2454103

Molecular Weight (calculated)

19737.7 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.251

Length

173 amino acids

Sequence
(BLAST)

001: MSRSVEPLVV GRVIGEVLDT FNPCMKMIVT YNSNKLVFNG HELYPSAVVS KPRVEVQGGD LRSFFTLVMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAS
101: FGREVISYES PKPNIGIHRF IFVLFKQKRR QTVIVPSFRD HFNTRRFAEE NDLGLPVAAV YFNAQRETAA RRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.