Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03840.1 | KRH28841 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH76618 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH01783 | AT5G38480.1 | 23613197 |
| AT5G03840.1 | KRH46909 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30839 | Soybean | cytosol | 93.1 | 93.64 |
| KRG96189 | Soybean | cytosol | 82.76 | 83.24 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 76.44 | 77.33 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 74.14 | 74.14 |
| Zm00001d050649_P001 | Maize | cytosol | 73.56 | 73.99 |
| EES06907 | Sorghum | cytosol | 73.56 | 73.99 |
| EES16646 | Sorghum | cytosol | 73.56 | 73.99 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 72.99 | 73.41 |
| Os04t0411400-01 | Rice | cytosol | 72.99 | 73.41 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 72.99 | 73.41 |
| KRG89440 | Soybean | cytosol | 31.61 | 73.33 |
| KRH09103 | Soybean | cytosol | 72.41 | 73.26 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 72.41 | 72.83 |
| KRH26623 | Soybean | cytosol | 60.92 | 72.6 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 72.99 | 72.57 |
| EES12110 | Sorghum | cytosol | 71.84 | 72.25 |
| GSMUA_Achr10P... | Banana | cytosol | 71.84 | 72.25 |
| EES09271 | Sorghum | cytosol | 71.84 | 72.25 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 71.84 | 72.25 |
| Os11t0152500-00 | Rice | cytosol | 71.84 | 72.25 |
| TraesCSU01G202000.1 | Wheat | cytosol | 71.84 | 72.25 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 71.84 | 72.25 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 71.84 | 72.25 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 71.84 | 72.25 |
| Os02t0531600-01 | Rice | cytosol | 71.84 | 72.25 |
| PGSC0003DMT400090526 | Potato | cytosol | 71.26 | 72.09 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 71.26 | 71.68 |
| Zm00001d023420_P001 | Maize | cytosol | 71.26 | 71.68 |
| Zm00001d025346_P001 | Maize | cytosol | 71.26 | 71.68 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 71.84 | 71.43 |
| KRH38557 | Soybean | cytosol | 70.69 | 71.1 |
| Solyc09g009560.1.1 | Tomato | cytosol | 70.11 | 70.93 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 71.26 | 70.86 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 71.26 | 70.45 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 70.69 | 70.29 |
| GSMUA_Achr10P... | Banana | cytosol | 70.11 | 70.11 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 69.54 | 69.14 |
| Zm00001d052537_P001 | Maize | cytosol | 70.11 | 68.93 |
| CDX80890 | Canola | cytosol | 68.39 | 68.39 |
| KRH22689 | Soybean | cytosol | 64.37 | 67.47 |
| Bra005783.1-P | Field mustard | cytosol | 68.39 | 67.23 |
| AT5G03840.1 | Thale cress | cytosol | 68.39 | 67.23 |
| CDY04899 | Canola | cytosol | 68.39 | 66.48 |
| CDY14173 | Canola | cytosol | 68.39 | 66.48 |
| Bra028815.1-P | Field mustard | cytosol | 68.39 | 66.48 |
| CDX70281 | Canola | cytosol | 67.82 | 66.29 |
| CDY41432 | Canola | cytosol | 67.82 | 66.29 |
| Bra009508.1-P | Field mustard | cytosol | 67.82 | 66.29 |
| Zm00001d044705_P001 | Maize | extracellular | 73.56 | 62.14 |
| KRH67905 | Soybean | plastid | 81.61 | 58.44 |
| KRH08450 | Soybean | cytosol | 57.47 | 56.82 |
| KRH08453 | Soybean | cytosol | 56.9 | 56.25 |
| KRH06760 | Soybean | cytosol | 55.17 | 55.81 |
| KRG94769 | Soybean | cytosol | 54.02 | 54.65 |
| KRH46900 | Soybean | cytosol | 27.59 | 54.55 |
| KRH01790 | Soybean | cytosol | 55.17 | 54.55 |
| KRH41796 | Soybean | cytosol | 30.46 | 53.54 |
| KRH06761 | Soybean | cytosol | 53.45 | 53.14 |
| KRH70112 | Soybean | cytosol | 35.63 | 52.99 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 60.92 | 52.22 |
| KRH70116 | Soybean | mitochondrion | 18.97 | 51.56 |
| KRG94768 | Soybean | cytosol | 51.72 | 51.43 |
| KRH01791 | Soybean | cytosol | 50.57 | 50.87 |
| KRH46899 | Soybean | cytosol | 51.15 | 50.86 |
| KRH01789 | Soybean | cytosol | 35.06 | 45.52 |
| KRH60500 | Soybean | endoplasmic reticulum | 49.43 | 45.26 |
| KRH45178 | Soybean | cytosol | 40.23 | 36.84 |
Protein Annotations
| EntrezGene:100787529 | MapMan:27.8.1 | Gene3D:3.90.280.10 | EMBL:ACUP02006154 | EMBL:FJ573241 | UniProt:G7Z0B5 |
| EnsemblPlantsGene:GLYMA_10G071400 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:1903506 | InterPro:IPR036610 | EMBL:KJ608005 | EnsemblPlants:KRH32734 | ProteinID:KRH32734 |
| ProteinID:KRH32734.1 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | ScanProsite:PS01220 |
| PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | InterPro:TFL1-like | UniParc:UPI0001CAC68A |
Description
hypothetical protein
Coordinates
chr10:-:7211433..7213114
Molecular Weight (calculated)
19789.9 Da
IEP (calculated)
10.214
GRAVY (calculated)
-0.386
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MARMSTDPLI IGRVIGDVLG SFTPTIKMTV TYNKKQVYNG YEFFPSTITT RPRVEIGGGD MRSFYTLIMT DPDVPGPSDP YLREHLHWMV TDIPGTTNAS
101: FGKVLVSYEM PNPNIGIHRY VFVLLKQKRR QCVTRPPSSR DHFNTRKFSA ENDLGLPVAA VYFNAQRETA ARRR
101: FGKVLVSYEM PNPNIGIHRY VFVLLKQKRR QCVTRPPSSR DHFNTRKFSA ENDLGLPVAA VYFNAQRETA ARRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.