CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38557	Soybean	cytosol	97.67	97.11
VIT_16s0100g00700.t01	Wine grape	cytosol	81.98	81.5
Solyc03g026050.2.1	Tomato	cytosol	80.23	78.86
PGSC0003DMT400037143	Potato	cytosol	80.23	78.86
PGSC0003DMT400030575	Potato	cytosol	80.23	78.86
GSMUA_Achr11P...	Banana	cytosol	79.07	78.61
Solyc01g009560.1.1	Tomato	cytosol	77.91	76.57
PGSC0003DMT400030582	Potato	cytosol	39.53	76.4
GSMUA_Achr5P20040_001	Banana	cytosol	74.42	73.99
KRG96189	Soybean	cytosol	73.26	72.83
KRH32734	Soybean	cytosol	73.26	72.41
KRH30839	Soybean	cytosol	72.67	72.25
Bra010052.1-P	Field mustard	cytosol	70.93	68.93
AT5G62040.1	Thale cress	cytosol	70.35	68.36
KRH26623	Soybean	cytosol	56.4	66.44
KRG89440	Soybean	cytosol	28.49	65.33
Solyc01g009580.1.1	Tomato	plastid	81.98	63.51
KRH22689	Soybean	cytosol	58.72	60.84
KRH08450	Soybean	cytosol	60.47	59.09
CDX86931	Canola	cytosol	70.93	58.94
CDY00248	Canola	cytosol	70.93	58.94
KRH08453	Soybean	cytosol	59.88	58.52
KRH06761	Soybean	cytosol	59.3	58.29
KRH46900	Soybean	cytosol	29.65	57.95
KRG94769	Soybean	cytosol	56.4	56.4
KRH06760	Soybean	cytosol	56.4	56.4
KRH70116	Soybean	mitochondrion	20.93	56.25
KRG94768	Soybean	cytosol	56.98	56.0
KRH01790	Soybean	cytosol	56.4	55.11
KRH01791	Soybean	cytosol	55.23	54.91
KRH41796	Soybean	cytosol	30.81	53.54
KRH46899	Soybean	cytosol	54.07	53.14
KRH70112	Soybean	cytosol	36.05	52.99
KRH67905	Soybean	plastid	72.67	51.44
KRH60500	Soybean	endoplasmic reticulum	52.91	47.89
KRH01789	Soybean	cytosol	35.47	45.52
KRH45178	Soybean	cytosol	38.95	35.26

Protein Annotations

EntrezGene:100174966	MapMan:27.8.1	Gene3D:3.90.280.10	EMBL:ACUP02010270	UniProt:B3SN57	EMBL:BT091343
EMBL:EF532597	EMBL:FJ573238	EnsemblPlantsGene:GLYMA_16G196300	InterPro:IPR036610	EMBL:KJ608001	ProteinID:KRH09102.1
EnsemblPlants:KRH09103	ProteinID:KRH09103	ProteinID:KRH09103.1	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk
PFAM:PF01161	ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF22	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777
UniParc:UPI000178F6D5	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:35777815..35779317

Molecular Weight (calculated)

19345.4 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.337

Length

172 amino acids

Sequence
(BLAST)

001: MSRLMEPLVV GRVIGEVVDI FSPSVKMNVT YSTKQVANGH ELMPSTIMAK PRVEIGGDDM RTAYTLIMTD PDAPSPSDPC LREHLHWMVT DIPGTTDVSF
101: GKEIVGYESP KPVIGIHRYV FILFKQRGRQ TVRPPSSRDH FNTRRFSEEN GLGLPVAAVY FNAQRETAAR RR

Best Arabidopsis Sequence Match ( AT5G03840.1 )
(BLAST)

001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR

Arabidopsis Description

TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.