CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010052.1-P	Field mustard	cytosol	85.51	100.0
CDX86931	Canola	cytosol	98.55	98.55
AT5G62040.1	Thale cress	cytosol	77.29	90.4
KRH09103	Soybean	cytosol	58.94	70.93
Solyc03g026050.2.1	Tomato	cytosol	59.9	70.86
PGSC0003DMT400037143	Potato	cytosol	59.9	70.86
VIT_16s0100g00700.t01	Wine grape	cytosol	58.45	69.94
KRH38557	Soybean	cytosol	57.97	69.36
GSMUA_Achr11P...	Banana	cytosol	57.97	69.36
PGSC0003DMT400030575	Potato	cytosol	57.97	68.57
GSMUA_Achr5P20040_001	Banana	cytosol	56.04	67.05
Solyc01g009560.1.1	Tomato	cytosol	56.04	66.29
PGSC0003DMT400030582	Potato	cytosol	27.05	62.92
CDY41432	Canola	cytosol	52.17	60.67
CDX70281	Canola	cytosol	51.69	60.11
CDX80890	Canola	cytosol	50.24	59.77
CDX83272	Canola	cytosol	49.76	58.86
CDY27416	Canola	cytosol	49.76	58.86
CDY30540	Canola	cytosol	49.76	58.86
CDY31183	Canola	cytosol	49.76	58.86
CDY51916	Canola	cytosol	49.76	58.86
CDY14173	Canola	cytosol	50.72	58.66
CDY04899	Canola	cytosol	50.72	58.66
CDY04503	Canola	cytosol	49.28	58.29
CDY60941	Canola	cytosol	49.28	58.29
CDY07452	Canola	cytosol	49.28	58.29
CDX77127	Canola	cytosol	32.37	58.26
CDY16409	Canola	cytosol	48.79	57.71
CDX71440	Canola	cytosol	48.79	57.71
CDX87561	Canola	cytosol	49.28	57.63
Solyc01g009580.1.1	Tomato	plastid	58.94	54.95
CDY02016	Canola	cytosol	46.38	54.86
CDX81861	Canola	cytosol	42.03	50.29
CDY21719	Canola	cytosol	42.03	50.29
CDY60777	Canola	cytosol	42.03	50.0
CDY39282	Canola	cytosol, mitochondrion, nucleus	28.02	50.0
CDY26185	Canola	cytosol	41.55	49.71
CDY13571	Canola	cytosol	43.96	45.05
CDY65847	Canola	cytosol	19.81	28.87

Protein Annotations

EnsemblPlants:CDY00248	EnsemblPlantsGene:GSBRNA2T00109800001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF22	PFAM:PF01161	ProteinID:CDY00248
ProteinID:CDY00248.1	ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0004EE04F7	MapMan:27.8.1	:

Description

BnaA06g21490D

Coordinates

chrLK031917:+:412655..413677

Molecular Weight (calculated)

23659.5 Da

IEP (calculated)

10.213

GRAVY (calculated)

-0.412

Length

207 amino acids

Sequence
(BLAST)

001: MAHSKETSIN HNTHYTIEKS CSNKRKKRSI MSREIEPLIV GRVIGDVIEM FNPSVTMRVT YNSNTVVSNG HELAPSLLLS RPRVEIGGHD LRSFFTLIMM
101: DPDAPSPSNP YMREYLHWMV TDIPGTTDAS FGREMVRYET PKPVIGIHRY AFVLFRQRGR QTVKAAPATR ECFNTRDFSA FFGLSLPVAA VYFNAQRETA
201: PRRRPSY

Best Arabidopsis Sequence Match ( AT5G62040.1 )
(BLAST)

001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY

Arabidopsis Description

BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.