CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012010.1-P	Field mustard	cytosol	100.0	100.0
CDX71440	Canola	cytosol	99.43	99.43
CDY27416	Canola	cytosol	96.57	96.57
CDY51916	Canola	cytosol	96.57	96.57
CDY30540	Canola	cytosol	96.57	96.57
CDX83272	Canola	cytosol	95.43	95.43
AT2G27550.1	Thale cress	cytosol	93.71	93.71
CDY31183	Canola	cytosol	93.71	93.71
CDX77127	Canola	cytosol	60.57	92.17
VIT_06s0080g00290.t01	Wine grape	cytosol	80.57	81.5
PGSC0003DMT400018307	Potato	cytosol	65.71	77.7
GSMUA_Achr3P03070_001	Banana	cytosol	75.43	76.3
KRH26623	Soybean	cytosol	63.43	76.03
GSMUA_Achr3P22720_001	Banana	cytosol	74.29	74.71
Os12t0152000-00	Rice	cytosol, extracellular	73.71	74.57
Os04t0411400-01	Rice	cytosol	73.71	74.57
GSMUA_Achr8P07730_001	Banana	cytosol	74.29	74.29
EES16646	Sorghum	cytosol	73.14	73.99
EES06907	Sorghum	cytosol	72.57	73.41
Os11t0152500-00	Rice	cytosol	72.57	73.41
TraesCS5A01G128600.1	Wheat	cytosol	72.57	73.41
TraesCS5B01G127600.1	Wheat	cytosol	72.57	73.41
TraesCS5D01G136300.1	Wheat	cytosol	72.57	73.41
Os02t0531600-01	Rice	cytosol	72.0	72.83
TraesCS2B01G310700.1	Wheat	cytosol	72.0	72.83
Zm00001d023420_P001	Maize	cytosol	72.0	72.83
Zm00001d025346_P001	Maize	cytosol	72.0	72.83
EES12110	Sorghum	cytosol	72.0	72.83
GSMUA_Achr10P...	Banana	cytosol	72.0	72.41
TraesCSU01G202000.1	Wheat	cytosol	71.43	72.25
HORVU2Hr1G072750.4	Barley	cytosol	71.43	72.25
EES09271	Sorghum	cytosol	71.43	72.25
TraesCS4D01G305800.1	Wheat	cytosol	72.0	72.0
Zm00001d050649_P001	Maize	cytosol	70.86	71.68
TraesCS2D01G292000.1	Wheat	cytosol	70.86	71.68
Zm00001d003804_P001	Maize	cytosol, extracellular	72.0	71.59
HORVU5Hr1G042230.13	Barley	cytosol	71.43	71.43
TraesCS4A01G409200.1	Wheat	cytosol	71.43	71.43
Solyc06g074350.2.1	Tomato	cytosol	71.43	71.43
KRH22689	Soybean	cytosol	67.43	71.08
TraesCS4B01G307600.1	Wheat	cytosol	70.86	70.86
GSMUA_Achr10P...	Banana	cytosol	69.71	70.52
Zm00001d052537_P001	Maize	cytosol	69.71	68.93
CDX80890	Canola	cytosol	68.0	68.39
CDY04899	Canola	cytosol	69.14	67.6
CDY14173	Canola	cytosol	69.14	67.6
CDY41432	Canola	cytosol	66.86	65.73
CDX70281	Canola	cytosol	65.71	64.61
Zm00001d044705_P001	Maize	extracellular	72.57	61.65
CDY60941	Canola	cytosol	57.71	57.71
CDY16409	Canola	cytosol	57.71	57.71
CDY07452	Canola	cytosol	55.43	55.43
CDX87561	Canola	cytosol	56.0	55.37
CDY02016	Canola	cytosol	54.86	54.86
CDX81861	Canola	cytosol	51.43	52.02
CDY21719	Canola	cytosol	51.43	52.02
HORVU4Hr1G078770.1	Barley	cytosol	60.0	51.72
CDY60777	Canola	cytosol	50.29	50.57
CDY26185	Canola	cytosol	49.71	50.29
CDY39282	Canola	cytosol, mitochondrion, nucleus	33.14	50.0
CDY00248	Canola	cytosol	58.29	49.28
CDX86931	Canola	cytosol	58.29	49.28
CDY13571	Canola	cytosol	54.86	47.52
CDY65847	Canola	cytosol	22.86	28.17

Protein Annotations

EnsemblPlants:CDY04503	EnsemblPlantsGene:GSBRNA2T00118670001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF48	PFAM:PF01161	ProteinID:CDY04503
ProteinID:CDY04503.1	ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI000254192C	MapMan:27.8.1	:

Description

BnaA07g13290D

Coordinates

chrLK031955:+:323612..325564

Molecular Weight (calculated)

19776.7 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.236

Length

175 amino acids

Sequence
(BLAST)

001: MARISADPLM VGRVIGDVVD SCLQAVKMTV TYNCDKQVYN GHELFPSAVT NKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: TFGNEIVGYE MPRPNIGIHR FVYLLFKQNR RGSVVSVPSY RDQFNTRMFA HDNDLGLPVA AVFFNCQRET AARRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.