Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 95.38 | 93.75 |
| EES12110 | Sorghum | cytosol | 92.49 | 92.49 |
| Os04t0411400-01 | Rice | cytosol | 87.86 | 87.86 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 86.13 | 86.13 |
| TraesCSU01G202000.1 | Wheat | cytosol | 85.55 | 85.55 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 84.97 | 84.97 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 84.39 | 84.39 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 83.81 | 82.86 |
| Zm00001d050649_P001 | Maize | cytosol | 82.08 | 82.08 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 82.08 | 81.14 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 82.08 | 81.14 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 80.35 | 80.35 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 79.19 | 78.74 |
| Zm00001d023420_P001 | Maize | cytosol | 78.61 | 78.61 |
| GSMUA_Achr10P... | Banana | cytosol | 78.03 | 78.03 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 77.46 | 76.57 |
| Zm00001d052537_P001 | Maize | cytosol | 77.46 | 75.71 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 75.14 | 75.58 |
| GSMUA_Achr10P... | Banana | cytosol | 75.72 | 75.29 |
| KRG96189 | Soybean | cytosol | 75.14 | 75.14 |
| PGSC0003DMT400090526 | Potato | cytosol | 73.99 | 74.42 |
| Solyc09g009560.1.1 | Tomato | cytosol | 73.41 | 73.84 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 72.83 | 72.83 |
| CDY51916 | Canola | cytosol | 73.41 | 72.57 |
| CDY30540 | Canola | cytosol | 73.41 | 72.57 |
| CDY27416 | Canola | cytosol | 73.41 | 72.57 |
| Bra034357.1-P | Field mustard | cytosol | 73.41 | 72.57 |
| CDX77127 | Canola | cytosol | 47.98 | 72.17 |
| CDX83272 | Canola | cytosol | 72.83 | 72.0 |
| Bra000506.1-P | Field mustard | cytosol | 72.83 | 72.0 |
| Bra012010.1-P | Field mustard | cytosol | 72.83 | 72.0 |
| AT2G27550.1 | Thale cress | cytosol | 72.83 | 72.0 |
| CDY04503 | Canola | cytosol | 72.83 | 72.0 |
| KRH26623 | Soybean | cytosol | 60.69 | 71.92 |
| KRH30839 | Soybean | cytosol | 71.68 | 71.68 |
| PGSC0003DMT400018307 | Potato | cytosol | 61.27 | 71.62 |
| CDX71440 | Canola | cytosol | 72.25 | 71.43 |
| CDY31183 | Canola | cytosol | 72.25 | 71.43 |
| KRH32734 | Soybean | cytosol | 71.68 | 71.26 |
| Solyc06g074350.2.1 | Tomato | cytosol | 69.36 | 68.57 |
| KRG89440 | Soybean | cytosol | 28.9 | 66.67 |
| KRH22689 | Soybean | cytosol | 63.58 | 66.27 |
| CDX80890 | Canola | cytosol | 66.47 | 66.09 |
| Zm00001d044705_P001 | Maize | extracellular | 78.61 | 66.02 |
| CDY04899 | Canola | cytosol | 67.63 | 65.36 |
| CDY14173 | Canola | cytosol | 67.63 | 65.36 |
| Bra028815.1-P | Field mustard | cytosol | 67.63 | 65.36 |
| CDY41432 | Canola | cytosol | 67.05 | 65.17 |
| Bra009508.1-P | Field mustard | cytosol | 67.05 | 65.17 |
| CDX70281 | Canola | cytosol | 67.05 | 65.17 |
| AT5G03840.1 | Thale cress | cytosol | 66.47 | 64.97 |
| Bra005783.1-P | Field mustard | cytosol | 66.47 | 64.97 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 71.1 | 60.59 |
| Zm00001d036242_P001 | Maize | cytosol | 59.54 | 58.19 |
| Zm00001d008939_P001 | Maize | cytosol | 56.65 | 56.65 |
| Zm00001d004630_P001 | Maize | cytosol | 56.07 | 54.8 |
| Zm00001d038725_P001 | Maize | cytosol | 35.84 | 52.99 |
| Zm00001d017134_P001 | Maize | cytosol | 53.18 | 52.87 |
| KRH67905 | Soybean | plastid | 73.99 | 52.67 |
| Zm00001d043461_P001 | Maize | cytosol | 53.18 | 51.98 |
| Zm00001d040113_P003 | Maize | cytosol | 53.76 | 51.67 |
| Zm00001d025737_P001 | Maize | cytosol | 52.02 | 51.43 |
| Zm00001d010752_P001 | Maize | cytosol | 50.29 | 49.71 |
| Zm00001d046300_P001 | Maize | cytosol | 53.18 | 49.2 |
| Zm00001d024023_P001 | Maize | cytosol | 49.13 | 48.57 |
| Zm00001d016253_P001 | Maize | cytosol | 49.71 | 46.74 |
| Zm00001d003226_P001 | Maize | cytosol | 41.62 | 46.45 |
| Zm00001d004010_P001 | Maize | cytosol | 26.01 | 43.27 |
| Zm00001d008446_P006 | Maize | cytosol | 51.45 | 42.79 |
| Zm00001d037439_P001 | Maize | extracellular | 47.4 | 41.41 |
| Zm00001d006116_P001 | Maize | cytosol | 50.87 | 40.37 |
Protein Annotations
| EnsemblPlants:Zm00001d025346_P001 | EnsemblPlants:Zm00001d025346_T001 | EnsemblPlantsGene:Zm00001d025346 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP |
| InterPro:PEBP-like_sf | InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF43 | PFAM:PF01161 |
| ProteinID:ABX11007.1 | ProteinID:AQK43564.1 | ProteinID:AQK43565.1 | ScanProsite:PS01220 | SUPFAM:SSF49777 | UniParc:UPI0000F5287D |
| UniProt:A9LLX9 | MapMan:27.8.1 | : | : | : | : |
Description
phosphatidylethanolamine-binding proteinProtein TERMINAL FLOWER 1
Coordinates
chr10:-:115025067..115026953
Molecular Weight (calculated)
19643.4 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.350
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRALEPLVV GKVIGEVIDN FNPTVKMTVT YGSDKQVFNG HEFFPSAVLS KPRVQVQGDD MRSFFTLVMT DPDVPGPSDP YLREHLHWMV TDIPGTTDAS
101: FGREQVMYES PKPYIGFHRF VFVLFKQSSR QSVCPPSSRD YFNTRRFAAD NNLGLPVAAV YFNAQRETAA RRR
101: FGREQVMYES PKPYIGFHRF VFVLFKQSSR QSVCPPSSRD YFNTRRFAAD NNLGLPVAAV YFNAQRETAA RRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.