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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51916 Canola cytosol 100.0 100.0
CDY30540 Canola cytosol 100.0 100.0
CDY27416 Canola cytosol 100.0 100.0
Bra000506.1-P Field mustard cytosol 96.57 96.57
Bra012010.1-P Field mustard cytosol 96.57 96.57
AT2G27550.1 Thale cress cytosol 94.86 94.86
CDX77127 Canola cytosol 62.29 94.78
VIT_06s0080g00290.t01 Wine grape cytosol 80.0 80.92
PGSC0003DMT400018307 Potato cytosol 66.29 78.38
GSMUA_Achr3P03070_001 Banana cytosol 76.0 76.88
KRH26623 Soybean cytosol 64.0 76.71
GSMUA_Achr3P22720_001 Banana cytosol 74.86 75.29
Os04t0411400-01 Rice cytosol 74.29 75.14
Os12t0152000-00 Rice cytosol, extracellular 74.29 75.14
GSMUA_Achr8P07730_001 Banana cytosol 74.86 74.86
TraesCS5B01G127600.1 Wheat cytosol 73.71 74.57
TraesCS5D01G136300.1 Wheat cytosol 73.71 74.57
TraesCS5A01G128600.1 Wheat cytosol 73.71 74.57
EES16646 Sorghum cytosol 73.71 74.57
Os11t0152500-00 Rice cytosol 73.71 74.57
Os02t0531600-01 Rice cytosol 72.57 73.41
EES06907 Sorghum cytosol 72.57 73.41
EES12110 Sorghum cytosol 72.57 73.41
Zm00001d023420_P001 Maize cytosol 72.57 73.41
Zm00001d050649_P001 Maize cytosol 72.57 73.41
TraesCS2B01G310700.1 Wheat cytosol 72.57 73.41
Zm00001d025346_P001 Maize cytosol 72.57 73.41
GSMUA_Achr10P... Banana cytosol 72.57 72.99
HORVU2Hr1G072750.4 Barley cytosol 72.0 72.83
EES09271 Sorghum cytosol 72.0 72.83
TraesCSU01G202000.1 Wheat cytosol 72.0 72.83
HORVU5Hr1G042230.13 Barley cytosol 72.57 72.57
Solyc06g074350.2.1 Tomato cytosol 72.57 72.57
TraesCS4D01G305800.1 Wheat cytosol 72.57 72.57
TraesCS2D01G292000.1 Wheat cytosol 71.43 72.25
Zm00001d003804_P001 Maize cytosol, extracellular 72.57 72.16
TraesCS4A01G409200.1 Wheat cytosol 72.0 72.0
KRH22689 Soybean cytosol 68.0 71.69
TraesCS4B01G307600.1 Wheat cytosol 71.43 71.43
GSMUA_Achr10P... Banana cytosol 70.29 71.1
Zm00001d052537_P001 Maize cytosol 70.86 70.06
Bra028815.1-P Field mustard cytosol 70.29 68.72
Bra005783.1-P Field mustard cytosol 68.57 67.8
Bra009508.1-P Field mustard cytosol 67.43 66.29
Zm00001d044705_P001 Maize extracellular 73.14 62.14
Bra010052.1-P Field mustard cytosol 58.86 58.19
Bra022475.1-P Field mustard cytosol 57.71 57.71
Bra004117.1-P Field mustard cytosol 55.43 55.43
Bra015710.1-P Field mustard mitochondrion 48.0 54.55
Bra031016.1-P Field mustard cytosol 51.43 52.02
HORVU4Hr1G078770.1 Barley cytosol 60.0 51.72
Bra025930.1-P Field mustard cytosol 49.71 50.29
Protein Annotations
EnsemblPlants:Bra034357.1EnsemblPlants:Bra034357.1-PEnsemblPlantsGene:Bra034357Gene3D:3.90.280.10InterPro:IPR036610InterPro:PEBP
InterPro:PEBP-like_sfInterPro:PEBP_eukInterPro:Phosphotidylethanolamine-bd_CSPANTHER:PTHR11362PANTHER:PTHR11362:SF48PFAM:PF01161
ScanProsite:PS01220SUPFAM:SSF49777UniParc:UPI0002543A74UniProt:M4EZW4MapMan:27.8.1:
Description
AT2G27550 (E=5e-096) ATC | ATC (ARABIDOPSIS THALIANA CENTRORADIALIS); phosphatidylethanolamine binding
Coordinates
chrA04:+:12120076..12121798
Molecular Weight (calculated)
19889.9 Da
IEP (calculated)
8.077
GRAVY (calculated)
-0.273
Length
175 amino acids
Sequence
(BLAST)
001: MSRISSDPLM VGRVIGDVVD NCLQAVKMTV TYNCDKQVYN GHELFPSAVT NKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: TFGKEIVGYE MPRPNIGIHR FVYLLFKQNR RGSVVSVPSY RDQFNTRMFA YENDLGLPVA AVFFNCQRET AARRR
Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.