Factsheet for Bra025930.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26185	Canola	cytosol	100.0	100.0
Bra031016.1-P	Field mustard	cytosol	94.8	94.8
AT1G18100.1	Thale cress	cytosol	93.06	93.06
VIT_17s0000g02630.t01	Wine grape	cytosol	76.88	77.33
KRH41796	Soybean	cytosol	39.88	69.7
KRH60500	Soybean	endoplasmic reticulum	74.57	67.89
PGSC0003DMT400014409	Potato	cytosol	67.63	67.63
Solyc03g119100.1.1	Tomato	cytosol	67.63	67.63
GSMUA_AchrUn_...	Banana	cytosol	64.16	64.53
GSMUA_Achr6P09410_001	Banana	cytosol	64.16	64.53
GSMUA_Achr3P20880_001	Banana	cytosol	64.16	64.53
Os06t0498800-01	Rice	cytosol, extracellular, plastid	65.32	64.2
EES02614	Sorghum	cytosol	62.43	63.16
TraesCS7A01G229400.1	Wheat	cytosol, golgi	63.58	61.11
TraesCS7B01G195200.1	Wheat	cytosol	63.58	61.11
TraesCS7D01G230000.1	Wheat	cytosol	63.58	61.11
Zm00001d040113_P003	Maize	cytosol	62.43	60.0
TraesCS3B01G010100.1	Wheat	cytosol	60.12	59.43
TraesCS3B01G007400.1	Wheat	cytosol	57.23	58.58
TraesCS3A01G006600.1	Wheat	cytosol	58.96	58.29
KXG19938	Sorghum	cytosol	60.12	57.46
Os01t0111600-01	Rice	cytosol	57.23	56.9
HORVU7Hr1G046660.6	Barley	cytosol	58.96	56.04
HORVU3Hr1G001000.2	Barley	cytosol	60.12	53.89
TraesCS3D01G004100.1	Wheat	cytosol	59.54	53.09
Zm00001d037439_P001	Maize	extracellular	59.54	52.02
Zm00001d008446_P006	Maize	cytosol	62.43	51.92
Bra034357.1-P	Field mustard	cytosol	50.29	49.71
Bra012010.1-P	Field mustard	cytosol	50.29	49.71
Bra000506.1-P	Field mustard	cytosol	50.29	49.71
Bra009508.1-P	Field mustard	cytosol	50.29	48.88
Bra010052.1-P	Field mustard	cytosol	49.71	48.59
Bra005783.1-P	Field mustard	cytosol	47.98	46.89
Bra028815.1-P	Field mustard	cytosol	47.4	45.81
Bra004117.1-P	Field mustard	cytosol	46.24	45.71
Bra022475.1-P	Field mustard	cytosol	45.66	45.14
Bra015710.1-P	Field mustard	mitochondrion	38.73	43.51

Protein Annotations

EnsemblPlants:Bra025930.1	EnsemblPlants:Bra025930.1-P	EnsemblPlantsGene:Bra025930	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF42	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0001EECFB1	UniProt:M4EAX1	MapMan:27.8.1	:

Description

AT1G18100 (E=8e-093) E12A11 | E12A11; phosphatidylethanolamine binding

Coordinates

chrA06:-:6948626..6950394

Molecular Weight (calculated)

18918.1 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.112

Length

173 amino acids

Sequence
(BLAST)

001: MAASVDPLVV GRVIGDVLDM YIPTANMSVY VGPKHITNGC EIKPSAAVKP PKVNISGNPD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSKG
101: KEILPYMEPK PPVGIHRYIF VLFRQISPVG LMVQQPPSRA NFSTRMFAGH LDLGLPVATV YFNAQKEPAS GRR

Best Arabidopsis Sequence Match ( AT1G18100.1 )
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR

Arabidopsis Description

MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.