Factsheet for Bra005783.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010504.1-P
Bra011648.1-P
Bra017735.1-P
Bra028187.1-P
Bra028409.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Bra010504.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra011648.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra017735.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra028187.1-P	AT5G38480.1	23613197
AT5G03840.1	Bra028409.1-P	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80890	Canola	cytosol	94.92	96.55
AT5G03840.1	Thale cress	cytosol	95.48	95.48
Bra028815.1-P	Field mustard	cytosol	92.09	91.06
Bra009508.1-P	Field mustard	cytosol	87.01	86.52
VIT_08s0007g03450.t01	Wine grape	cytosol	72.88	75.0
KRG96189	Soybean	cytosol	72.88	74.57
EES16646	Sorghum	cytosol	71.19	72.83
EES09271	Sorghum	cytosol	70.62	72.25
Os11t0152500-00	Rice	cytosol	70.62	72.25
Zm00001d050649_P001	Maize	cytosol	70.06	71.68
GSMUA_Achr3P03070_001	Banana	cytosol	70.06	71.68
PGSC0003DMT400090526	Potato	cytosol	69.49	71.51
Solyc09g009560.1.1	Tomato	cytosol	69.49	71.51
TraesCS5A01G128600.1	Wheat	cytosol	69.49	71.1
Zm00001d023420_P001	Maize	cytosol	69.49	71.1
TraesCS5D01G136300.1	Wheat	cytosol	69.49	71.1
TraesCS5B01G127600.1	Wheat	cytosol	69.49	71.1
EES06907	Sorghum	cytosol	68.93	70.52
Os12t0152000-00	Rice	cytosol, extracellular	68.93	70.52
Os04t0411400-01	Rice	cytosol	68.93	70.52
TraesCS2D01G292000.1	Wheat	cytosol	68.36	69.94
Os02t0531600-01	Rice	cytosol	68.36	69.94
TraesCSU01G202000.1	Wheat	cytosol	67.8	69.36
TraesCS2B01G310700.1	Wheat	cytosol	67.8	69.36
HORVU2Hr1G072750.4	Barley	cytosol	67.8	69.36
GSMUA_Achr8P07730_001	Banana	cytosol	68.36	69.14
TraesCS4D01G305800.1	Wheat	cytosol	68.36	69.14
Zm00001d052537_P001	Maize	cytosol	68.93	68.93
EES12110	Sorghum	cytosol	67.23	68.79
Bra034357.1-P	Field mustard	cytosol	67.8	68.57
Bra000506.1-P	Field mustard	cytosol	67.8	68.57
TraesCS4A01G409200.1	Wheat	cytosol	67.8	68.57
HORVU5Hr1G042230.13	Barley	cytosol	67.8	68.57
GSMUA_Achr3P22720_001	Banana	cytosol	67.23	68.39
KRH32734	Soybean	cytosol	67.23	68.39
KRG89440	Soybean	cytosol	28.81	68.0
TraesCS4B01G307600.1	Wheat	cytosol	67.23	68.0
GSMUA_Achr10P...	Banana	cytosol	66.1	67.63
Bra012010.1-P	Field mustard	cytosol	66.67	67.43
KRH30839	Soybean	cytosol	65.54	67.05
GSMUA_Achr10P...	Banana	cytosol	65.54	66.67
Zm00001d003804_P001	Maize	cytosol, extracellular	66.1	66.48
Zm00001d025346_P001	Maize	cytosol	64.97	66.47
Zm00001d044705_P001	Maize	extracellular	71.75	61.65
Bra010052.1-P	Field mustard	cytosol	59.89	59.89
Bra022475.1-P	Field mustard	cytosol	56.5	57.14
Bra004117.1-P	Field mustard	cytosol	54.24	54.86
KRH67905	Soybean	plastid	74.58	54.32
Bra015710.1-P	Field mustard	mitochondrion	46.33	53.25
HORVU4Hr1G078770.1	Barley	cytosol	57.06	49.75
Bra031016.1-P	Field mustard	cytosol	48.59	49.71
Bra025930.1-P	Field mustard	cytosol	46.89	47.98

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	EnsemblPlantsGene:Bra005783	EnsemblPlants:Bra005783.1	EnsemblPlants:Bra005783.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003712	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009910	GO:GO:0009987	GO:GO:1903506
InterPro:IPR036610	UniProt:M4CNJ5	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like
UniParc:UPI000253FB8C	:	:	:	:	:

Description

AT5G03840 (E=1e-096) TFL1, TFL-1 | TFL1 (TERMINAL FLOWER 1); phosphatidylethanolamine binding

Coordinates

chrA03:-:603455..604516

Molecular Weight (calculated)

20112.4 Da

IEP (calculated)

10.132

GRAVY (calculated)

-0.159

Length

177 amino acids

Sequence
(BLAST)

001: MENMGVRVIE PLIMGRVVGD VLDFFTPTIK MNVSYNKNQV SNGHELLPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFKQ KQRRVIFPNI PSRDNFNTRK FAIEYDLGLP VAAVFFNAQR ETAARRR

Best Arabidopsis Sequence Match ( AT5G03840.1 )
(BLAST)

001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR

Arabidopsis Description

TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.