Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005783.1-P | Field mustard | cytosol | 95.48 | 95.48 |
| CDX80890 | Canola | cytosol | 93.22 | 94.83 |
| Bra028815.1-P | Field mustard | cytosol | 90.96 | 89.94 |
| CDY14173 | Canola | cytosol | 90.4 | 89.39 |
| CDY04899 | Canola | cytosol | 90.4 | 89.39 |
| CDY41432 | Canola | cytosol | 87.57 | 87.08 |
| Bra009508.1-P | Field mustard | cytosol | 86.44 | 85.96 |
| CDX70281 | Canola | cytosol | 86.44 | 85.96 |
| KRG96189 | Soybean | cytosol | 74.01 | 75.72 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 72.32 | 74.42 |
| Zm00001d050649_P001 | Maize | cytosol | 71.19 | 72.83 |
| EES16646 | Sorghum | cytosol | 71.19 | 72.83 |
| Os11t0152500-00 | Rice | cytosol | 70.62 | 72.25 |
| EES09271 | Sorghum | cytosol | 70.62 | 72.25 |
| EES06907 | Sorghum | cytosol | 70.06 | 71.68 |
| PGSC0003DMT400090526 | Potato | cytosol | 69.49 | 71.51 |
| Solyc09g009560.1.1 | Tomato | cytosol | 69.49 | 71.51 |
| Os02t0531600-01 | Rice | cytosol | 69.49 | 71.1 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 69.49 | 71.1 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 69.49 | 71.1 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 69.49 | 71.1 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 69.49 | 71.1 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 69.49 | 71.1 |
| Zm00001d023420_P001 | Maize | cytosol | 69.49 | 71.1 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 68.93 | 70.52 |
| Os04t0411400-01 | Rice | cytosol | 68.93 | 70.52 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 68.36 | 69.94 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 68.36 | 69.94 |
| TraesCSU01G202000.1 | Wheat | cytosol | 68.36 | 69.94 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 68.36 | 69.54 |
| KRG89440 | Soybean | cytosol | 29.38 | 69.33 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 68.36 | 69.14 |
| KRH32734 | Soybean | cytosol | 67.23 | 68.39 |
| Zm00001d052537_P001 | Maize | cytosol | 68.36 | 68.36 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 67.23 | 68.0 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 67.23 | 68.0 |
| EES12110 | Sorghum | cytosol | 66.1 | 67.63 |
| AT2G27550.1 | Thale cress | cytosol | 66.67 | 67.43 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 66.67 | 67.43 |
| KRH30839 | Soybean | cytosol | 65.54 | 67.05 |
| GSMUA_Achr10P... | Banana | cytosol | 65.54 | 67.05 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 66.1 | 66.86 |
| GSMUA_Achr10P... | Banana | cytosol | 65.54 | 66.67 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 66.1 | 66.48 |
| Zm00001d025346_P001 | Maize | cytosol | 64.97 | 66.47 |
| Zm00001d044705_P001 | Maize | extracellular | 71.75 | 61.65 |
| AT5G62040.1 | Thale cress | cytosol | 58.19 | 58.19 |
| KRH67905 | Soybean | plastid | 74.58 | 54.32 |
| AT4G20370.1 | Thale cress | cytosol | 53.67 | 54.29 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 56.5 | 49.26 |
| AT1G18100.1 | Thale cress | cytosol | 48.02 | 49.13 |
| AT1G65480.2 | Thale cress | cytosol | 55.93 | 45.21 |
Protein Annotations
| PDB:1WKO | MapMan:27.8.1 | Gene3D:3.90.280.10 | EntrezGene:831683 | UniProt:A0A178UKP0 | ProteinID:AAM27943.1 |
| ProteinID:AAM27944.1 | ProteinID:AAM27945.1 | ProteinID:AAM27946.1 | ProteinID:AAM27948.1 | ProteinID:AAM27949.1 | ProteinID:AAM27950.1 |
| ProteinID:AAM27951.1 | ProteinID:AAM27954.1 | ProteinID:AAM27955.1 | ProteinID:AAM27956.1 | ProteinID:ABY79172.1 | ProteinID:ABY79173.1 |
| ProteinID:ABY79177.1 | ProteinID:ABY79186.1 | ProteinID:ABY79187.1 | ProteinID:ABY79188.1 | ProteinID:ABY79189.1 | ProteinID:ABY79190.1 |
| ProteinID:ABY79193.1 | ProteinID:ABY79194.1 | ProteinID:AED90661.1 | ProteinID:ANS12868.1 | ArrayExpress:AT5G03840 | EnsemblPlantsGene:AT5G03840 |
| RefSeq:AT5G03840 | TAIR:AT5G03840 | RefSeq:AT5G03840-TAIR-G | EnsemblPlants:AT5G03840.1 | TAIR:AT5G03840.1 | ProteinID:BAA20483.1 |
| ProteinID:BAA20484.1 | ProteinID:BAA20485.1 | ProteinID:BAB08610.1 | EMBL:BT024828 | ProteinID:CAB85504.1 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006623 | GO:GO:0006810 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009744 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0030154 | GO:GO:0031982 |
| GO:GO:0090344 | GO:GO:1903506 | InterPro:IPR036610 | RefSeq:NP_196004.1 | ProteinID:OAO93664.1 | UniProt:P93003 |
| InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000229 | PO:PO:0000230 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006079 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS01220 |
| PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | UniProt:Q547P7 | SUPFAM:SSF49777 | Symbol:TFL1 |
| InterPro:TFL1-like | EMBL:U77674 | UniParc:UPI00000010FB | : | : | : |
Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
Coordinates
chr5:-:1024500..1025872
Molecular Weight (calculated)
20159.4 Da
IEP (calculated)
10.288
GRAVY (calculated)
-0.224
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.