Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G307600.1 | Wheat | cytosol | 96.57 | 96.57 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 96.0 | 96.0 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 88.57 | 89.6 |
| Os04t0411400-01 | Rice | cytosol | 85.14 | 86.13 |
| Zm00001d025346_P001 | Maize | cytosol | 82.86 | 83.81 |
| EES12110 | Sorghum | cytosol | 82.86 | 83.81 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 81.71 | 81.25 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 80.57 | 81.03 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 78.86 | 79.77 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 78.29 | 79.19 |
| GSMUA_Achr10P... | Banana | cytosol | 78.29 | 79.19 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 78.29 | 78.29 |
| GSMUA_Achr10P... | Banana | cytosol | 77.71 | 78.16 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 74.86 | 76.16 |
| KRG96189 | Soybean | cytosol | 74.86 | 75.72 |
| CDX77127 | Canola | cytosol | 49.14 | 74.78 |
| KRH26623 | Soybean | cytosol | 62.29 | 74.66 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 73.14 | 73.99 |
| PGSC0003DMT400018307 | Potato | cytosol | 62.29 | 73.65 |
| CDX83272 | Canola | cytosol | 73.14 | 73.14 |
| AT2G27550.1 | Thale cress | cytosol | 73.14 | 73.14 |
| CDY31183 | Canola | cytosol | 73.14 | 73.14 |
| Bra000506.1-P | Field mustard | cytosol | 73.14 | 73.14 |
| PGSC0003DMT400090526 | Potato | cytosol | 71.43 | 72.67 |
| CDY27416 | Canola | cytosol | 72.57 | 72.57 |
| CDY51916 | Canola | cytosol | 72.57 | 72.57 |
| CDY30540 | Canola | cytosol | 72.57 | 72.57 |
| Bra034357.1-P | Field mustard | cytosol | 72.57 | 72.57 |
| CDY04503 | Canola | cytosol | 72.0 | 72.0 |
| Bra012010.1-P | Field mustard | cytosol | 72.0 | 72.0 |
| KRH30839 | Soybean | cytosol | 70.86 | 71.68 |
| CDX71440 | Canola | cytosol | 71.43 | 71.43 |
| KRH32734 | Soybean | cytosol | 70.86 | 71.26 |
| Solyc09g009560.1.1 | Tomato | cytosol | 69.71 | 70.93 |
| Solyc06g074350.2.1 | Tomato | cytosol | 68.57 | 68.57 |
| CDX80890 | Canola | cytosol | 68.0 | 68.39 |
| Bra005783.1-P | Field mustard | cytosol | 69.14 | 68.36 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 78.86 | 67.98 |
| Bra009508.1-P | Field mustard | cytosol | 69.14 | 67.98 |
| CDX70281 | Canola | cytosol | 69.14 | 67.98 |
| CDY04899 | Canola | cytosol | 69.14 | 67.6 |
| CDY14173 | Canola | cytosol | 69.14 | 67.6 |
| Bra028815.1-P | Field mustard | cytosol | 69.14 | 67.6 |
| AT5G03840.1 | Thale cress | cytosol | 68.0 | 67.23 |
| CDY41432 | Canola | cytosol | 68.0 | 66.85 |
| KRH22689 | Soybean | cytosol | 62.29 | 65.66 |
| KRG89440 | Soybean | cytosol | 26.86 | 62.67 |
| TraesCS7D01G111600.1 | Wheat | cytosol | 60.0 | 59.32 |
| TraesCS3D01G144500.1 | Wheat | cytosol | 56.0 | 54.44 |
| KRH67905 | Soybean | plastid | 73.71 | 53.09 |
| TraesCS6D01G197100.1 | Wheat | cytosol | 52.57 | 52.87 |
| TraesCS2D01G345700.1 | Wheat | cytosol | 52.0 | 52.3 |
| TraesCS2D01G134200.1 | Wheat | cytosol | 50.86 | 51.45 |
| TraesCS7D01G230000.1 | Wheat | cytosol | 52.57 | 51.11 |
| TraesCS4D01G072300.1 | Wheat | cytosol | 51.43 | 50.28 |
| TraesCS2D01G485100.1 | Wheat | cytosol | 49.14 | 49.71 |
| TraesCS1D01G340800.1 | Wheat | cytosol | 50.29 | 49.16 |
| TraesCS2D01G538000.1 | Wheat | cytosol | 42.29 | 48.68 |
| TraesCS6D01G152500.1 | Wheat | cytosol | 49.71 | 47.54 |
| TraesCS2D01G538100.1 | Wheat | cytosol | 46.86 | 47.4 |
| TraesCS3D01G011700.1 | Wheat | cytosol | 46.86 | 46.86 |
| TraesCS3D01G011600.1 | Wheat | cytosol | 46.86 | 46.86 |
| TraesCS5D01G159500.1 | Wheat | cytosol | 47.43 | 46.63 |
| TraesCS5D01G304400.1 | Wheat | cytosol | 47.43 | 46.63 |
| TraesCS3D01G004100.1 | Wheat | cytosol | 51.43 | 46.39 |
| TraesCS3D01G011500.1 | Wheat | cytosol | 46.29 | 46.29 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G305800.1 | EnsemblPlantsGene:TraesCS4D01G305800 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF43 | PFAM:PF01161 | ScanProsite:PS01220 |
| SUPFAM:SSF49777 | TIGR:cd00866 | MapMan:27.8.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:474377073..474378013
Molecular Weight (calculated)
19607.4 Da
IEP (calculated)
9.829
GRAVY (calculated)
-0.333
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVRNPLVV GKVIGEVIDN FNPMVNMTVT YSSDKQVSNG HEFLPSAVVS KPRIQVPGGD MRSFFTLVMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAS
101: FGSEVVSYES PKPTIGIHRF VFVLFKQKKR QAVNPRAPST RDCFNTRRFA DENDLGLPVA AVYFNAQRET AARRR
101: FGSEVVSYES PKPTIGIHRF VFVLFKQKKR QAVNPRAPST RDCFNTRRFA DENDLGLPVA AVYFNAQRET AARRR
001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
Arabidopsis Description
BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.