CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01783
KRH28841
KRH46909
KRH76618

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	KRH28841	AT4G35900.1	16099980
AT5G03840.1	KRH76618	AT4G35900.1	16099980
AT5G03840.1	KRH01783	AT5G38480.1	23613197
AT5G03840.1	KRH46909	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32734	Soybean	cytosol	93.64	93.1
KRG96189	Soybean	cytosol	83.81	83.81
VIT_08s0007g03450.t01	Wine grape	cytosol	75.14	75.58
Os04t0411400-01	Rice	cytosol	74.57	74.57
EES06907	Sorghum	cytosol	73.99	73.99
GSMUA_Achr3P22720_001	Banana	cytosol	73.99	73.56
Zm00001d050649_P001	Maize	cytosol	73.41	73.41
EES12110	Sorghum	cytosol	73.41	73.41
KRG89440	Soybean	cytosol	31.79	73.33
TraesCS2D01G292000.1	Wheat	cytosol	72.83	72.83
Os12t0152000-00	Rice	cytosol, extracellular	72.83	72.83
GSMUA_Achr10P...	Banana	cytosol	72.83	72.83
GSMUA_Achr3P03070_001	Banana	cytosol	72.83	72.83
KRH09103	Soybean	cytosol	72.25	72.67
KRH26623	Soybean	cytosol	61.27	72.6
TraesCS2B01G310700.1	Wheat	cytosol	72.25	72.25
Os02t0531600-01	Rice	cytosol	72.25	72.25
EES16646	Sorghum	cytosol	72.25	72.25
TraesCSU01G202000.1	Wheat	cytosol	72.25	72.25
HORVU2Hr1G072750.4	Barley	cytosol	71.68	71.68
Os11t0152500-00	Rice	cytosol	71.68	71.68
Zm00001d025346_P001	Maize	cytosol	71.68	71.68
PGSC0003DMT400090526	Potato	cytosol	71.1	71.51
GSMUA_Achr8P07730_001	Banana	cytosol	72.25	71.43
KRH38557	Soybean	cytosol	71.1	71.1
TraesCS5B01G127600.1	Wheat	cytosol	71.1	71.1
TraesCS5A01G128600.1	Wheat	cytosol	71.1	71.1
EES09271	Sorghum	cytosol	71.1	71.1
TraesCS5D01G136300.1	Wheat	cytosol	71.1	71.1
TraesCS4D01G305800.1	Wheat	cytosol	71.68	70.86
Zm00001d003804_P001	Maize	cytosol, extracellular	71.68	70.45
Solyc09g009560.1.1	Tomato	cytosol	69.94	70.35
Zm00001d023420_P001	Maize	cytosol	69.94	69.94
TraesCS4A01G409200.1	Wheat	cytosol	70.52	69.71
TraesCS4B01G307600.1	Wheat	cytosol	70.52	69.71
GSMUA_Achr10P...	Banana	cytosol	68.79	68.39
Zm00001d052537_P001	Maize	cytosol	69.94	68.36
HORVU5Hr1G042230.13	Barley	cytosol	68.79	68.0
KRH22689	Soybean	cytosol	64.16	66.87
CDX80890	Canola	cytosol	67.05	66.67
Bra005783.1-P	Field mustard	cytosol	67.05	65.54
AT5G03840.1	Thale cress	cytosol	67.05	65.54
Bra009508.1-P	Field mustard	cytosol	67.05	65.17
CDX70281	Canola	cytosol	67.05	65.17
CDY41432	Canola	cytosol	67.05	65.17
Bra028815.1-P	Field mustard	cytosol	67.05	64.8
CDY04899	Canola	cytosol	67.05	64.8
CDY14173	Canola	cytosol	67.05	64.8
Zm00001d044705_P001	Maize	extracellular	72.25	60.68
KRH67905	Soybean	plastid	81.5	58.02
KRH08450	Soybean	cytosol	56.65	55.68
KRH08453	Soybean	cytosol	56.07	55.11
KRH06760	Soybean	cytosol	53.18	53.49
KRH46900	Soybean	cytosol	27.17	53.41
KRH06761	Soybean	cytosol	53.18	52.57
KRH41796	Soybean	cytosol	30.06	52.53
KRG94769	Soybean	cytosol	52.02	52.33
KRH01790	Soybean	cytosol	53.18	52.27
HORVU4Hr1G078770.1	Barley	cytosol	61.27	52.22
KRH70112	Soybean	cytosol	35.26	52.14
KRG94768	Soybean	cytosol	51.45	50.86
KRH70116	Soybean	mitochondrion	18.5	50.0
KRH46899	Soybean	cytosol	50.29	49.71
KRH01791	Soybean	cytosol	49.71	49.71
KRH60500	Soybean	endoplasmic reticulum	50.29	45.79
KRH01789	Soybean	cytosol	34.1	44.03
KRH45178	Soybean	cytosol	39.88	36.32

Protein Annotations

EntrezGene:100790794	MapMan:27.8.1	Gene3D:3.90.280.10	EMBL:ACUP02007085	EMBL:FJ573240	UniProt:G7Z0B4
EnsemblPlantsGene:GLYMA_11G209500	GO:GO:0000003	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009910
GO:GO:0009987	GO:GO:1903506	InterPro:IPR036610	EMBL:KJ608006	EnsemblPlants:KRH30839	ProteinID:KRH30839
ProteinID:KRH30839.1	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161	ScanProsite:PS01220
PANTHER:PTHR11362	PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like	UniParc:UPI0001CAC68B

Description

hypothetical protein

Coordinates

chr11:+:30131080..30134126

Molecular Weight (calculated)

19807.9 Da

IEP (calculated)

10.101

GRAVY (calculated)

-0.405

Length

173 amino acids

Sequence
(BLAST)

001: MAKMWTDPLF IGRVIGDVLD SFTPTIKMTV TYKKQVYNGH EFFPSTITTR PKVEIGGGDM RSFYTLIMTD PDVPGPSDPY LREHLHWMVT DIPGTTNASF
101: GNVLVSYEMP KPNIGIHRYV FVLFKQKRRQ CVTRPPSSRD HFSTRKFSAE NDLGLPVASV YFNAQRETAA RRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.