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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G151000.2
TraesCS4A01G268700.1
TraesCS4B01G045500.2
TraesCS4B01G159900.1
TraesCS4D01G046400.2
TraesCS4D01G155900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03840.1 TraesCS4A01G151000.2 AT5G38480.1 23613197
AT5G03840.1 TraesCS4A01G268700.1 AT5G38480.1 23613197
AT5G03840.1 TraesCS4B01G045500.2 AT5G38480.1 23613197
AT5G03840.1 TraesCS4B01G159900.1 AT5G38480.1 23613197
AT5G03840.1 TraesCS4D01G046400.2 AT5G38480.1 23613197
AT5G03840.1 TraesCS4D01G155900.1 AT5G38480.1 23613197
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G128600.1 Wheat cytosol 100.0 100.0
TraesCS5D01G136300.1 Wheat cytosol 99.42 99.42
HORVU5Hr1G042230.13 Barley cytosol 97.11 96.0
Os11t0152500-00 Rice cytosol 94.8 94.8
EES16646 Sorghum cytosol 94.22 94.22
EES09271 Sorghum cytosol 91.91 91.91
Zm00001d023420_P001 Maize cytosol 91.33 91.33
Os12t0152000-00 Rice cytosol, extracellular 89.6 89.6
Zm00001d052537_P001 Maize cytosol 89.6 87.57
TraesCS2B01G310700.1 Wheat cytosol 82.08 82.08
VIT_08s0007g03450.t01 Wine grape cytosol 81.5 81.98
Zm00001d044705_P001 Maize extracellular 94.22 79.13
KRG96189 Soybean cytosol 78.03 78.03
PGSC0003DMT400090526 Potato cytosol 76.88 77.33
Solyc09g009560.1.1 Tomato cytosol 76.3 76.74
TraesCS4B01G307600.1 Wheat cytosol 77.46 76.57
CDX77127 Canola cytosol 50.87 76.52
PGSC0003DMT400018307 Potato cytosol 64.74 75.68
AT2G27550.1 Thale cress cytosol 75.14 74.29
VIT_06s0080g00290.t01 Wine grape cytosol 73.99 73.99
CDY51916 Canola cytosol 74.57 73.71
CDY30540 Canola cytosol 74.57 73.71
CDY27416 Canola cytosol 74.57 73.71
Bra034357.1-P Field mustard cytosol 74.57 73.71
Bra012010.1-P Field mustard cytosol 73.41 72.57
CDY04503 Canola cytosol 73.41 72.57
CDX83272 Canola cytosol 73.41 72.57
Bra000506.1-P Field mustard cytosol 73.41 72.57
Solyc06g074350.2.1 Tomato cytosol 72.83 72.0
CDX71440 Canola cytosol 72.83 72.0
CDY31183 Canola cytosol 72.83 72.0
KRH32734 Soybean cytosol 72.25 71.84
KRH30839 Soybean cytosol 71.1 71.1
KRH26623 Soybean cytosol 59.54 70.55
CDX80890 Canola cytosol 70.52 70.11
CDY04899 Canola cytosol 72.25 69.83
Bra028815.1-P Field mustard cytosol 72.25 69.83
CDY14173 Canola cytosol 72.25 69.83
Bra005783.1-P Field mustard cytosol 71.1 69.49
AT5G03840.1 Thale cress cytosol 71.1 69.49
CDY41432 Canola cytosol 70.52 68.54
KRG89440 Soybean cytosol 29.48 68.0
Bra009508.1-P Field mustard cytosol 69.94 67.98
CDX70281 Canola cytosol 69.94 67.98
KRH22689 Soybean cytosol 60.12 62.65
TraesCS7B01G013100.1 Wheat cytosol 60.12 58.76
KRH67905 Soybean plastid 77.46 55.14
TraesCS2B01G365300.1 Wheat cytosol 53.76 53.45
TraesCS6B01G244400.1 Wheat cytosol 53.18 52.87
TraesCS3B01G010100.1 Wheat cytosol 52.02 51.43
TraesCS1B01G351100.1 Wheat cytosol 53.18 51.11
TraesCS4B01G379100.1 Wheat cytosol 53.18 51.11
TraesCS3B01G007400.1 Wheat cytosol 49.71 50.89
TraesCS4B01G073800.1 Wheat cytosol 52.6 50.84
TraesCS4B01G380600.1 Wheat cytosol 52.02 50.28
TraesCS2B01G511400.1 Wheat cytosol 49.71 50.0
TraesCS2B01G154800.1 Wheat cytosol 49.71 49.71
TraesCS5B01G296600.1 Wheat cytosol 50.87 49.44
TraesCS6B01G191200.1 Wheat cytosol 52.02 49.18
TraesCS5B01G020300.1 Wheat cytosol 49.71 49.14
TraesCS2B01G567400.1 Wheat cytosol 49.13 49.13
TraesCS3B01G015200.1 Wheat cytosol 49.13 48.57
TraesCS3B01G015600.2 Wheat cytosol 48.55 48.0
TraesCS3B01G015700.1 Wheat cytosol 48.55 48.0
TraesCS2B01G567200.1 Wheat cytosol 47.98 47.98
TraesCS7B01G195200.1 Wheat cytosol 49.71 47.78
TraesCS7B01G272600.1 Wheat cytosol 47.4 47.4
TraesCS3B01G015800.1 Wheat cytosol 47.4 46.86
TraesCS3B01G162000.1 Wheat cytosol 57.8 46.73
TraesCS5B01G152800.1 Wheat cytosol 47.98 46.63
TraesCS4B01G380500.1 Wheat cytosol, nucleus, plastid 24.86 45.74
Protein Annotations
MapMan:27.8.1Gene3D:3.90.280.10GO:GO:0000003GO:GO:0003674GO:GO:0003712GO:GO:0007275
GO:GO:0008150GO:GO:0009791GO:GO:0009908GO:GO:0009910InterPro:IPR036610InterPro:PEBP
InterPro:PEBP-like_sfInterPro:PEBP_eukPFAM:PF01161ScanProsite:PS01220PANTHER:PTHR11362PANTHER:PTHR11362:SF13
InterPro:Phosphotidylethanolamine-bd_CSSUPFAM:SSF49777InterPro:TFL1-likeEnsemblPlantsGene:TraesCS5B01G127600EnsemblPlants:TraesCS5B01G127600.1TIGR:cd00866
Description
No Description!
Coordinates
chr5B:-:232785136..232786136
Molecular Weight (calculated)
19607.5 Da
IEP (calculated)
9.131
GRAVY (calculated)
-0.250
Length
173 amino acids
Sequence
(BLAST)
001: MSRSVEPLIV GRVIGEVLDT FNPCVKMVTT YNSNKLVFNG HELYPSAVVS KPRVEVQGGD LRSLFTLVMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAS
101: FGREVISYES PKPNIGIHRF IFVLFKQKRR QTVTVPSFRD HFNTRQFAAE NDLGLPVAAV YFNCQRETAA RRR
Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.