Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g009560.1.1 | Tomato | cytosol | 95.35 | 95.35 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 80.23 | 80.23 |
| EES16646 | Sorghum | cytosol | 79.65 | 79.19 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 79.07 | 78.61 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 79.07 | 78.16 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 77.91 | 77.46 |
| Os11t0152500-00 | Rice | cytosol | 77.91 | 77.46 |
| KRG96189 | Soybean | cytosol | 77.91 | 77.46 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 78.49 | 77.14 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 77.33 | 76.88 |
| EES09271 | Sorghum | cytosol | 77.33 | 76.88 |
| Os04t0411400-01 | Rice | cytosol | 77.33 | 76.88 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 77.33 | 76.88 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 77.33 | 76.88 |
| Zm00001d050649_P001 | Maize | cytosol | 76.74 | 76.3 |
| Zm00001d023420_P001 | Maize | cytosol | 76.74 | 76.3 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 76.74 | 76.3 |
| GSMUA_Achr10P... | Banana | cytosol | 76.74 | 76.3 |
| TraesCSU01G202000.1 | Wheat | cytosol | 76.16 | 75.72 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 76.16 | 75.72 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 76.16 | 75.72 |
| Os02t0531600-01 | Rice | cytosol | 76.16 | 75.72 |
| EES12110 | Sorghum | cytosol | 76.16 | 75.72 |
| EES06907 | Sorghum | cytosol | 75.58 | 75.14 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 76.16 | 74.43 |
| Zm00001d025346_P001 | Maize | cytosol | 74.42 | 73.99 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 75.0 | 73.71 |
| GSMUA_Achr10P... | Banana | cytosol | 74.42 | 73.56 |
| PGSC0003DMT400018307 | Potato | cytosol | 62.79 | 72.97 |
| Zm00001d052537_P001 | Maize | cytosol | 75.0 | 72.88 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 73.84 | 72.57 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 72.67 | 71.43 |
| KRH32734 | Soybean | cytosol | 72.09 | 71.26 |
| KRH30839 | Soybean | cytosol | 71.51 | 71.1 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 72.09 | 70.86 |
| CDX80890 | Canola | cytosol | 71.51 | 70.69 |
| Bra028815.1-P | Field mustard | cytosol | 72.67 | 69.83 |
| CDY04899 | Canola | cytosol | 72.67 | 69.83 |
| CDY14173 | Canola | cytosol | 72.67 | 69.83 |
| AT5G03840.1 | Thale cress | cytosol | 71.51 | 69.49 |
| Bra005783.1-P | Field mustard | cytosol | 71.51 | 69.49 |
| KRG89440 | Soybean | cytosol | 30.23 | 69.33 |
| PGSC0003DMT400030575 | Potato | cytosol | 68.6 | 67.43 |
| CDY41432 | Canola | cytosol | 69.77 | 67.42 |
| CDX70281 | Canola | cytosol | 68.6 | 66.29 |
| Bra009508.1-P | Field mustard | cytosol | 68.6 | 66.29 |
| Zm00001d044705_P001 | Maize | extracellular | 78.49 | 65.53 |
| PGSC0003DMT400037143 | Potato | cytosol | 63.95 | 62.86 |
| PGSC0003DMT400030582 | Potato | cytosol | 31.98 | 61.8 |
| KRH67905 | Soybean | plastid | 78.49 | 55.56 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 62.21 | 52.71 |
| PGSC0003DMT400060057 | Potato | cytosol | 52.33 | 52.02 |
| PGSC0003DMT400041726 | Potato | cytosol | 49.42 | 48.85 |
| PGSC0003DMT400014409 | Potato | cytosol | 48.84 | 48.55 |
| PGSC0003DMT400041725 | Potato | cytosol | 48.84 | 47.46 |
Protein Annotations
| EntrezGene:102581689 | MapMan:27.8.1 | Gene3D:3.90.280.10 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003712 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006623 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009744 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0031982 | GO:GO:0090344 | GO:GO:1903506 | InterPro:IPR036610 |
| UniProt:M1DKL0 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | EnsemblPlantsGene:PGSC0003DMG400040097 |
| PGSC:PGSC0003DMG400040097 | EnsemblPlants:PGSC0003DMT400090526 | ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS |
| SUPFAM:SSF49777 | InterPro:TFL1-like | UniParc:UPI000296A6EF | RefSeq:XP_006341131.1 | : | : |
Description
SP9D [Source:PGSC_GENE;Acc:PGSC0003DMG400040097]
Coordinates
chr9:-:3143568..3145963
Molecular Weight (calculated)
19481.2 Da
IEP (calculated)
8.505
GRAVY (calculated)
-0.341
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSLEPLIV GRVIGDVIDS FNPTIKMSIT YNNKLVCNGH ELFPSAVSSR PKVEVQGGDM RTFFTLVMTD PDVPGPSDTY LREHLHWIIT DIPGTTDATF
101: GRELVSYDIP RPNIGIHRFV FVLFKQKSRS SVSQPTSRDH FNTRNFAQEN DLEQPVAAVF FNAQRETAAR RR
101: GRELVSYDIP RPNIGIHRFV FVLFKQKSRS SVSQPTSRDH FNTRNFAQEN DLEQPVAAVF FNAQRETAAR RR
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.