Factsheet for GSMUA_Achr3P03070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P02630_001
GSMUA_Achr1P02640_001
GSMUA_Achr2P03490_001
GSMUA_Achr2P11200_001
GSMUA_Achr4P05090_001
GSMUA_Achr4P29580_001
GSMUA_Achr5P11220_001
GSMUA_Achr5P11470_001
GSMUA_Achr5P17850_001
GSMUA_Achr5P23090_001
GSMUA_Achr9P21040_001
GSMUA_Achr9P24090_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	GSMUA_Achr1P02630_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr1P02640_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr2P03490_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr2P11200_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr4P05090_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr4P29580_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P11220_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P11470_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P17850_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr9P21040_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr9P24090_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P23090_001	AT5G38480.1	23613197
AT5G03840.1	GSMUA_AchrUn_...	AT5G38480.1	23613197
AT5G03840.1	GSMUA_AchrUn_...	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	88.44	88.44
Os04t0411400-01	Rice	cytosol	85.55	85.55
GSMUA_Achr8P07730_001	Banana	cytosol	84.97	84.0
GSMUA_Achr3P22720_001	Banana	cytosol	84.39	83.91
EES06907	Sorghum	cytosol	83.81	83.81
Os02t0531600-01	Rice	cytosol	82.66	82.66
Zm00001d050649_P001	Maize	cytosol	82.66	82.66
EES12110	Sorghum	cytosol	82.08	82.08
TraesCSU01G202000.1	Wheat	cytosol	82.08	82.08
HORVU2Hr1G072750.4	Barley	cytosol	81.5	81.5
TraesCS2B01G310700.1	Wheat	cytosol	81.5	81.5
TraesCS2D01G292000.1	Wheat	cytosol	80.92	80.92
GSMUA_Achr10P...	Banana	cytosol	80.92	80.46
Zm00001d025346_P001	Maize	cytosol	80.35	80.35
Zm00001d003804_P001	Maize	cytosol, extracellular	81.5	80.11
VIT_06s0080g00290.t01	Wine grape	cytosol	79.19	79.19
TraesCS4D01G305800.1	Wheat	cytosol	79.77	78.86
VIT_08s0007g03450.t01	Wine grape	cytosol	78.03	78.49
PGSC0003DMT400018307	Potato	cytosol	67.05	78.38
TraesCS4A01G409200.1	Wheat	cytosol	79.19	78.29
PGSC0003DMT400090526	Potato	cytosol	77.46	77.91
TraesCS4B01G307600.1	Wheat	cytosol	78.61	77.71
KRG96189	Soybean	cytosol	76.88	76.88
Solyc09g009560.1.1	Tomato	cytosol	75.72	76.16
CDY51916	Canola	cytosol	76.88	76.0
CDY30540	Canola	cytosol	76.88	76.0
CDY27416	Canola	cytosol	76.88	76.0
Bra034357.1-P	Field mustard	cytosol	76.88	76.0
CDX77127	Canola	cytosol	50.29	75.65
AT2G27550.1	Thale cress	cytosol	76.3	75.43
Bra012010.1-P	Field mustard	cytosol	76.3	75.43
CDY04503	Canola	cytosol	76.3	75.43
Bra000506.1-P	Field mustard	cytosol	75.72	74.86
CDX83272	Canola	cytosol	75.72	74.86
Solyc06g074350.2.1	Tomato	cytosol	75.72	74.86
CDX71440	Canola	cytosol	75.72	74.86
CDY31183	Canola	cytosol	75.14	74.29
GSMUA_Achr11P...	Banana	cytosol	73.99	73.99
KRH26623	Soybean	cytosol	61.85	73.29
KRH30839	Soybean	cytosol	72.83	72.83
KRH32734	Soybean	cytosol	72.83	72.41
CDX80890	Canola	cytosol	71.1	70.69
GSMUA_Achr5P20040_001	Banana	cytosol	70.52	70.52
Bra028815.1-P	Field mustard	cytosol	72.83	70.39
CDY04899	Canola	cytosol	72.83	70.39
CDY14173	Canola	cytosol	72.83	70.39
Bra005783.1-P	Field mustard	cytosol	71.68	70.06
AT5G03840.1	Thale cress	cytosol	71.1	69.49
KRG89440	Soybean	cytosol	29.48	68.0
CDY41432	Canola	cytosol	69.94	67.98
Bra009508.1-P	Field mustard	cytosol	69.36	67.42
CDX70281	Canola	cytosol	69.36	67.42
KRH22689	Soybean	cytosol	63.58	66.27
GSMUA_Achr5P06420_001	Banana	cytosol	60.69	60.0
GSMUA_Achr5P06600_001	Banana	cytosol	60.12	59.43
GSMUA_Achr2P19310_001	Banana	cytosol	58.96	58.29
GSMUA_Achr2P19360_001	Banana	cytosol	59.54	58.19
GSMUA_Achr10P...	Banana	cytosol	57.8	57.47
HORVU4Hr1G078770.1	Barley	cytosol	67.05	57.14
GSMUA_Achr10P...	Banana	cytosol	58.38	57.06
GSMUA_Achr9P07900_001	Banana	cytosol	57.23	56.9
GSMUA_Achr10P...	Banana	cytosol	57.8	56.5
GSMUA_Achr2P20900_001	Banana	cytosol	56.07	55.75
GSMUA_Achr3P02730_001	Banana	cytosol	57.23	55.31
GSMUA_Achr4P08540_001	Banana	cytosol	57.23	55.31
GSMUA_Achr2P05870_001	Banana	cytosol	58.96	55.14
GSMUA_Achr6P09410_001	Banana	cytosol	54.34	54.65
KRH67905	Soybean	plastid	76.3	54.32
GSMUA_Achr3P20880_001	Banana	cytosol	53.76	54.07
GSMUA_Achr1P17050_001	Banana	cytosol	53.76	53.76
GSMUA_AchrUn_...	Banana	cytosol	52.6	52.91
GSMUA_Achr3P21510_001	Banana	cytosol	52.6	52.6

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03070_001	EnsemblPlants:GSMUA_Achr3T03070_001	EnsemblPlantsGene:GSMUA_Achr3G03070_001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF39	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0002963278	UniProt:M0SBC5	MapMan:27.8.1	:

Description

CEN-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03070_001]

Coordinates

chr3:-:1999755..2000718

Molecular Weight (calculated)

19605.4 Da

IEP (calculated)

9.798

GRAVY (calculated)

-0.340

Length

173 amino acids

Sequence
(BLAST)

001: MSRLIDPLVV GRVIGEVLDS FNPSVKMLVT YNSNKLVFNG HELYPSAVTS KPRVEVQGGD MRSFFTLVMT DPDAPGPSDP YLREHLHWIV TNIPGTTDAS
101: FGREMVSYES PRPNIGIHRF VFVLFKQQRR QAVSPPSSRD YFSTRRFAEE NDLGLPVAAV FFNSQRETAA RRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.