Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037251.1-P | Field mustard | nucleus | 27.12 | 34.29 |
| GSMUA_Achr1P02640_001 | Banana | nucleus | 28.81 | 34.23 |
| CDY30347 | Canola | nucleus | 29.94 | 29.44 |
| CDY26829 | Canola | nucleus | 29.94 | 29.12 |
| Bra002090.1-P | Field mustard | nucleus | 29.94 | 28.8 |
| AT2G17770.3 | Thale cress | nucleus | 31.64 | 28.72 |
| GSMUA_Achr2P03490_001 | Banana | nucleus | 32.77 | 28.43 |
| GSMUA_Achr5P11470_001 | Banana | nucleus | 32.77 | 27.88 |
| GSMUA_Achr9P21040_001 | Banana | nucleus | 30.51 | 27.84 |
| GSMUA_Achr4P29580_001 | Banana | nucleus | 29.94 | 27.32 |
| Solyc02g083520.2.1 | Tomato | nucleus, plastid | 32.2 | 26.27 |
| GSMUA_Achr4P05090_001 | Banana | nucleus | 24.29 | 25.0 |
| KRH76618 | Soybean | nucleus | 24.86 | 24.44 |
| VIT_18s0001g14890.t01 | Wine grape | nucleus | 29.38 | 24.3 |
| Solyc02g061990.2.1 | Tomato | nucleus | 24.29 | 24.16 |
| CDY24375 | Canola | nucleus | 31.07 | 23.81 |
| KRH28841 | Soybean | nucleus | 16.95 | 23.81 |
| Bra010504.1-P | Field mustard | nucleus | 29.38 | 23.42 |
| PGSC0003DMT400061403 | Potato | nucleus | 29.38 | 22.91 |
| VIT_00s0349g00050.t01 | Wine grape | nucleus | 23.16 | 22.65 |
| GSMUA_Achr5P11220_001 | Banana | nucleus, plastid | 33.33 | 22.43 |
| CDY24826 | Canola | nucleus | 29.94 | 21.81 |
| GSMUA_Achr2P11200_001 | Banana | nucleus | 29.38 | 21.31 |
| CDY47041 | Canola | nucleus | 31.07 | 21.24 |
| Bra017735.1-P | Field mustard | nucleus | 31.07 | 21.24 |
| CDX75538 | Canola | nucleus | 31.07 | 20.99 |
| CDY62049 | Canola | nucleus | 31.07 | 20.91 |
| PGSC0003DMT400009393 | Potato | nucleus | 19.77 | 20.83 |
| GSMUA_Achr5P17850_001 | Banana | nucleus | 27.68 | 20.25 |
| CDX69181 | Canola | nucleus | 30.51 | 20.0 |
| AT4G35900.1 | Thale cress | nucleus | 32.2 | 20.0 |
| Bra011648.1-P | Field mustard | nucleus | 29.38 | 19.85 |
| CDX72563 | Canola | nucleus | 29.94 | 18.86 |
| KRH61011 | Soybean | nucleus | 19.21 | 18.48 |
| KRH69737 | Soybean | nucleus | 24.86 | 18.26 |
| KRH51676 | Soybean | nucleus | 19.21 | 14.91 |
| GSMUA_Achr1P02630_001 | Banana | nucleus | 1.69 | 6.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P24090_001 | EnsemblPlants:GSMUA_Achr9T24090_001 | EnsemblPlantsGene:GSMUA_Achr9G24090_001 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF211 | ScanProsite:PS00036 | SEG:seg | UniParc:UPI000294AF80 |
| UniProt:M0U316 | MapMan:15.5.4.1 | : | : | : | : |
Description
Putative Protein FD [Source:GMGC_GENE;Acc:GSMUA_Achr9G24090_001]
Coordinates
chr9:-:28909303..28909836
Molecular Weight (calculated)
19214.6 Da
IEP (calculated)
8.908
GRAVY (calculated)
-0.504
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPYSSMLSK NTRIMEEVWK DISLSSLQQD MPSIPSLPPN HLERLCGVSS STTTSFKSII LQDFLTEHFK ATSDRSPPPS TALGLNSNLG GGSNGLSSSS
101: ASSFFSDGVG DGVVACCSKK HQMEHELNEE SGDRSDVDRR KKRMIKNRES AARSRARKQA SAPLSLSLSL SLTFSLQ
101: ASSFFSDGVG DGVVACCSKK HQMEHELNEE SGDRSDVDRR KKRMIKNRES AARSRARKQA SAPLSLSLSL SLTFSLQ
001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF
Arabidopsis Description
ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.