CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002090.1-P	Field mustard	nucleus	74.89	94.02
CDY30347	Canola	nucleus	64.5	82.78
CDY26829	Canola	nucleus	61.9	78.57
AT2G17770.3	Thale cress	nucleus	49.78	58.97
GSMUA_Achr1P02630_001	Banana	nucleus	9.96	48.94
KRH28841	Soybean	nucleus	24.24	44.44
KRH76618	Soybean	nucleus	34.2	43.89
CDY24826	Canola	nucleus	44.16	41.98
CDX69181	Canola	nucleus	48.92	41.85
VIT_00s0349g00050.t01	Wine grape	nucleus	32.03	40.88
CDY47041	Canola	nucleus	45.02	40.15
CDY62049	Canola	nucleus	45.45	39.92
CDX72563	Canola	nucleus	48.48	39.86
Solyc02g083520.2.1	Tomato	nucleus, plastid	37.23	39.63
CDX75538	Canola	nucleus	44.59	39.31
PGSC0003DMT400009393	Potato	nucleus	26.41	36.31
GSMUA_Achr5P11470_001	Banana	nucleus	32.47	36.06
GSMUA_Achr4P05090_001	Banana	nucleus	26.84	36.05
GSMUA_Achr9P21040_001	Banana	nucleus	29.87	35.57
PGSC0003DMT400061403	Potato	nucleus	34.63	35.24
GSMUA_Achr1P02640_001	Banana	nucleus	21.21	32.89
GSMUA_Achr4P29580_001	Banana	nucleus	27.27	32.47
GSMUA_Achr5P11220_001	Banana	nucleus, plastid	35.93	31.56
Solyc02g061990.2.1	Tomato	nucleus	24.24	31.46
GSMUA_Achr9P24090_001	Banana	nucleus	23.81	31.07
GSMUA_Achr5P17850_001	Banana	nucleus	32.47	30.99
GSMUA_Achr2P03490_001	Banana	nucleus	27.27	30.88
GSMUA_Achr2P11200_001	Banana	nucleus	28.14	26.64

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078GCZ8	UniProt:A0A078GCZ8	EnsemblPlants:CDY24375	ProteinID:CDY24375
ProteinID:CDY24375.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00026595001	InterPro:IPR004827
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0004EE0194	InterPro:bZIP	SEG:seg	:	:	:

Description

BnaA07g03000DBnaA07g03000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCZ8]

Coordinates

chrLK032157:+:531821..532767

Molecular Weight (calculated)

26499.2 Da

IEP (calculated)

10.369

GRAVY (calculated)

-1.029

Length

231 amino acids

Sequence
(BLAST)

001: MLSSAKHKIN HSAFSVSSSS SSLPHSYSQA KNMTQVTMEE VWKDINLASL HQHRQLNIDH EPMLSNQNPN NSIFKDFLNK PLNQEPQPLP PSSSSSTLHR
101: SLLPPPPPET VLSLNPHSIN THFDESARFG CFGKKRGGQE SDESRGDRRH KRMIKNRESA ARSRARKQEC LSPYFSPPYQ LHAYTNELEL AISHLQKENA
201: RLKRQEEQLK MAEATQHQTK RKLQRSWTTP F

Best Arabidopsis Sequence Match ( AT2G17770.2 )
(BLAST)

001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF

Arabidopsis Description

ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.