CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30347	Canola	nucleus	92.86	93.89
Bra037251.1-P	Field mustard	nucleus	69.23	90.0
CDY24375	Canola	nucleus	78.57	61.9
GSMUA_Achr1P02630_001	Banana	nucleus	13.19	51.06
AT2G17770.3	Thale cress	nucleus	51.65	48.21
KRH28841	Soybean	nucleus	29.67	42.86
VIT_00s0349g00050.t01	Wine grape	nucleus	41.21	41.44
KRH76618	Soybean	nucleus	40.11	40.56
CDY24826	Canola	nucleus	53.85	40.33
CDY62049	Canola	nucleus	56.04	38.78
CDX69181	Canola	nucleus	57.14	38.52
GSMUA_Achr9P21040_001	Banana	nucleus	39.01	36.6
CDY47041	Canola	nucleus	51.1	35.91
CDX72563	Canola	nucleus	54.95	35.59
Solyc02g083520.2.1	Tomato	nucleus, plastid	42.31	35.48
CDX75538	Canola	nucleus	50.55	35.11
GSMUA_Achr4P05090_001	Banana	nucleus	31.32	33.14
GSMUA_Achr4P29580_001	Banana	nucleus	35.16	32.99
GSMUA_Achr5P11470_001	Banana	nucleus	37.36	32.69
GSMUA_Achr1P02640_001	Banana	nucleus	26.37	32.21
PGSC0003DMT400009393	Potato	nucleus	29.67	32.14
GSMUA_Achr2P03490_001	Banana	nucleus	35.16	31.37
PGSC0003DMT400061403	Potato	nucleus	37.91	30.4
GSMUA_Achr9P24090_001	Banana	nucleus	29.12	29.94
GSMUA_Achr5P17850_001	Banana	nucleus	37.36	28.1
GSMUA_Achr5P11220_001	Banana	nucleus, plastid	39.56	27.38
GSMUA_Achr2P11200_001	Banana	nucleus	36.26	27.05
Solyc02g061990.2.1	Tomato	nucleus	24.73	25.28

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078GNK5	UniProt:A0A078GNK5	EnsemblPlants:CDY26829	ProteinID:CDY26829
ProteinID:CDY26829.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00035784001	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0004EE13D4	InterPro:bZIP	SEG:seg	:	:	:

Description

BnaC09g09560DBnaC09g09560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNK5]

Coordinates

chrLK032194:+:501588..502416

Molecular Weight (calculated)

21105.9 Da

IEP (calculated)

9.954

GRAVY (calculated)

-1.014

Length

182 amino acids

Sequence
(BLAST)

001: MTQVTMEEVW KDINLASLHP HRQLNIDHEP VLSNQTPNKS IFQDFLNKPL NQEPPPSSSS THHGSLLAPP ATVISLNTHF IDTHFDESAM FGCFGKKRGQ
101: DSDDSRGDRR HNRMTKNRES AARSRARKQE RAYINELELE IVHLKKENAR LKRQEEQMQL KMAEATQHQT KKILQRSWTS PF

Best Arabidopsis Sequence Match ( AT2G17770.2 )
(BLAST)

001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF

Arabidopsis Description

ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.