Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26829 | Canola | nucleus | 90.0 | 69.23 |
| CDY30347 | Canola | nucleus | 88.57 | 68.89 |
| Bra002090.1-P | Field mustard | nucleus | 74.29 | 56.52 |
| AT2G17770.3 | Thale cress | nucleus | 67.86 | 48.72 |
| Bra010504.1-P | Field mustard | nucleus | 55.71 | 35.14 |
| GSMUA_Achr1P02640_001 | Banana | nucleus | 33.57 | 31.54 |
| Bra017735.1-P | Field mustard | nucleus | 52.86 | 28.57 |
| GSMUA_Achr9P24090_001 | Banana | nucleus | 34.29 | 27.12 |
| Bra011648.1-P | Field mustard | nucleus | 50.71 | 27.1 |
| KRH76618 | Soybean | nucleus | 33.57 | 26.11 |
| VIT_00s0349g00050.t01 | Wine grape | nucleus | 33.57 | 25.97 |
| Solyc02g083520.2.1 | Tomato | nucleus, plastid | 38.57 | 24.88 |
| Solyc02g061990.2.1 | Tomato | nucleus | 31.43 | 24.72 |
| GSMUA_Achr9P21040_001 | Banana | nucleus | 33.57 | 24.23 |
| GSMUA_Achr4P29580_001 | Banana | nucleus | 32.86 | 23.71 |
| PGSC0003DMT400061403 | Potato | nucleus | 35.0 | 21.59 |
| GSMUA_Achr2P03490_001 | Banana | nucleus | 31.43 | 21.57 |
| KRH28841 | Soybean | nucleus | 19.29 | 21.43 |
| GSMUA_Achr5P11470_001 | Banana | nucleus | 31.43 | 21.15 |
| GSMUA_Achr4P05090_001 | Banana | nucleus | 25.71 | 20.93 |
| GSMUA_Achr5P11220_001 | Banana | nucleus, plastid | 35.71 | 19.01 |
| PGSC0003DMT400009393 | Potato | nucleus | 21.43 | 17.86 |
| GSMUA_Achr5P17850_001 | Banana | nucleus | 30.0 | 17.36 |
| GSMUA_Achr2P11200_001 | Banana | nucleus | 29.29 | 16.8 |
| GSMUA_Achr1P02630_001 | Banana | nucleus | 0.71 | 2.13 |
Protein Annotations
| EnsemblPlants:Bra037251.1 | EnsemblPlants:Bra037251.1-P | EnsemblPlantsGene:Bra037251 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | InterPro:bZIP | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF211 | ScanProsite:PS00036 | SEG:seg |
| SUPFAM:SSF57959 | UniParc:UPI0002541E62 | UniProt:M4F840 | MapMan:15.5.4.1 | : | : |
Description
AT2G17770 (E=1e-019) ATBZIP27, FDP | ATBZIP27; transcription factor
Coordinates
chrA09:+:4745903..4746325
Molecular Weight (calculated)
15976.6 Da
IEP (calculated)
9.685
GRAVY (calculated)
-1.017
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQVTMEEVW KEINLASLHP HRQLNIDHEP VLSNQNPNKS IFQDFLNKPL NQEPPPSSSS THHVSLLAPP ATVISLNTHS IDTHFDESAM FGCFGKKRGQ
101: DSDESRGDRR HKRMTKNRES AARSRARKQE RVSPYTSSPY
101: DSDESRGDRR HKRMTKNRES AARSRARKQE RVSPYTSSPY
001: MLSSAKHNKI NNHSAFSISS SSSSLSTSSS LGHNKSQVTM EEVWKEINLG SLHYHRQLNI GHEPMLKNQN PNNSIFQDFL NMPLNQPPPP PPPPSSSTIV
101: TALYGSLPLP PPATVLSLNS GVGFEFLDTT ENLLASNPRS FEESAKFGCL GKKRGQDSDD TRGDRRYKRM IKNRESAARS RARKQECVSP HSSTF
101: TALYGSLPLP PPATVLSLNS GVGFEFLDTT ENLLASNPRS FEESAKFGCL GKKRGQDSDD TRGDRRYKRM IKNRESAARS RARKQECVSP HSSTF
Arabidopsis Description
ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.