Factsheet for Solyc02g061990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g061990.2.1
Solyc02g083520.2.1
Solyc05g053850.2.1
Solyc05g055660.1.1
Solyc09g009560.1.1
Solyc11g008640.1.1
Solyc11g008660.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35900.1	Solyc05g053850.2.1	AT4G20370.1	19656342
AT4G35900.1	Solyc05g055660.1.1	AT4G20370.1	19656342
AT4G35900.1	Solyc11g008640.1.1	AT4G20370.1	19656342
AT4G35900.1	Solyc11g008660.1.1	AT4G20370.1	19656342
AT4G35900.1	Solyc02g061990.2.1	AT4G35900.1	16099979
AT4G35900.1	Solyc02g083520.2.1	AT4G35900.1	16099979
AT4G35900.1	Solyc09g009560.1.1	AT5G03840.1	16099980

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061403	Potato	nucleus	61.8	48.46
Solyc02g083520.2.1	Tomato	nucleus, plastid	41.01	33.64
Bra037251.1-P	Field mustard	nucleus	24.72	31.43
Bra002090.1-P	Field mustard	nucleus	30.9	29.89
AT2G17770.3	Thale cress	nucleus	32.02	29.23
Bra010504.1-P	Field mustard	nucleus	33.15	26.58
CDY30347	Canola	nucleus	26.4	26.11
KRH76618	Soybean	nucleus	25.84	25.56
KRH28841	Soybean	nucleus	17.98	25.4
VIT_00s0349g00050.t01	Wine grape	nucleus	25.28	24.86
CDY26829	Canola	nucleus	25.28	24.73
CDY24826	Canola	nucleus	33.71	24.69
GSMUA_Achr9P24090_001	Banana	nucleus	24.16	24.29
CDY24375	Canola	nucleus	31.46	24.24
GSMUA_Achr1P02640_001	Banana	nucleus	20.22	24.16
CDX75538	Canola	nucleus	34.83	23.66
Bra011648.1-P	Field mustard	nucleus	34.83	23.66
CDY47041	Canola	nucleus	34.27	23.55
Bra017735.1-P	Field mustard	nucleus	34.27	23.55
CDX69181	Canola	nucleus	34.83	22.96
CDY62049	Canola	nucleus	33.71	22.81
CDX72563	Canola	nucleus	35.39	22.42
GSMUA_Achr9P21040_001	Banana	nucleus	24.16	22.16
AT4G35900.1	Thale cress	nucleus	35.39	22.11
GSMUA_Achr4P05090_001	Banana	nucleus	20.22	20.93
GSMUA_Achr5P11470_001	Banana	nucleus	24.16	20.67
GSMUA_Achr5P17850_001	Banana	nucleus	27.53	20.25
GSMUA_Achr4P29580_001	Banana	nucleus	21.91	20.1
GSMUA_Achr5P11220_001	Banana	nucleus, plastid	29.21	19.77
GSMUA_Achr2P03490_001	Banana	nucleus	20.79	18.14
GSMUA_Achr2P11200_001	Banana	nucleus	21.35	15.57
GSMUA_Achr1P02630_001	Banana	nucleus	0.56	2.13

Protein Annotations

EnsemblPlants:Solyc02g061990.2.1	EnsemblPlantsGene:Solyc02g061990.2	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:bZIP
PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	ScanProsite:PS00036	SEG:seg	UniParc:UPI0002767ECC	UniProt:K4B689
MapMan:15.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:33560595..33561944

Molecular Weight (calculated)

19888.1 Da

IEP (calculated)

10.263

GRAVY (calculated)

-0.883

Length

178 amino acids

Sequence
(BLAST)

001: MWSSSSEEHH QNHQNLATNS SSSSSSCSYN HPINPILSIT SKTMEEVWKD INLSCSRDAQ NTSGMVLQDL LARPFANDPS TAAVTRAYGS PVPPPPVTML
101: TLNSVPEFHF FSNLNPIRQN QQKHISNDAL ASPAPGRKRH SESDNNNNNN SSELKNKRMI KNRESAARFR ARKLTRMN

Best Arabidopsis Sequence Match ( AT2G17770.3 )
(BLAST)

001: MLSSAKHNKI NNHSAFSISS SSSSLSTSSS LGHNKSQVTM EEVWKEINLG SLHYHRQLNI GHEPMLKNQN PNNSIFQDFL NMPLNQPPPP PPPPSSSTIV
101: TALYGSLPLP PPATVLSLNS GVGFEFLDTT ENLLASNPRS FEESAKFGCL GKKRGQDSDD TRGDRRYKRM IKNRESAARS RARKQECVSP HSSTF

Arabidopsis Description

ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.