CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26829	Canola	nucleus	93.89	92.86
Bra037251.1-P	Field mustard	nucleus	68.89	88.57
CDY24375	Canola	nucleus	82.78	64.5
GSMUA_Achr1P02630_001	Banana	nucleus	13.33	51.06
AT2G17770.3	Thale cress	nucleus	52.22	48.21
KRH28841	Soybean	nucleus	31.11	44.44
VIT_00s0349g00050.t01	Wine grape	nucleus	42.22	41.99
CDY24826	Canola	nucleus	55.56	41.15
KRH76618	Soybean	nucleus	41.11	41.11
CDX69181	Canola	nucleus	59.44	39.63
CDY62049	Canola	nucleus	57.22	39.16
GSMUA_Achr9P21040_001	Banana	nucleus	40.56	37.63
CDY47041	Canola	nucleus	52.78	36.68
CDX72563	Canola	nucleus	56.67	36.3
Solyc02g083520.2.1	Tomato	nucleus, plastid	43.33	35.94
CDX75538	Canola	nucleus	52.22	35.88
GSMUA_Achr4P05090_001	Banana	nucleus	32.22	33.72
GSMUA_Achr4P29580_001	Banana	nucleus	36.11	33.51
PGSC0003DMT400009393	Potato	nucleus	31.11	33.33
GSMUA_Achr5P11470_001	Banana	nucleus	38.33	33.17
GSMUA_Achr1P02640_001	Banana	nucleus	27.22	32.89
GSMUA_Achr2P03490_001	Banana	nucleus	36.11	31.86
PGSC0003DMT400061403	Potato	nucleus	38.33	30.4
GSMUA_Achr9P24090_001	Banana	nucleus	29.44	29.94
GSMUA_Achr5P17850_001	Banana	nucleus	37.78	28.1
GSMUA_Achr5P11220_001	Banana	nucleus, plastid	40.56	27.76
Solyc02g061990.2.1	Tomato	nucleus	26.11	26.4
GSMUA_Achr2P11200_001	Banana	nucleus	35.56	26.23

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078GYL6	UniProt:A0A078GYL6	EnsemblPlants:CDY30347	ProteinID:CDY30347
ProteinID:CDY30347.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00045030001	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0004EEE4BD	InterPro:bZIP	SEG:seg	:	:

Description

BnaA09g09300DBnaA09g09300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYL6]

Coordinates

chrLK032252:-:370059..370972

Molecular Weight (calculated)

20941.6 Da

IEP (calculated)

9.954

GRAVY (calculated)

-1.084

Length

180 amino acids

Sequence
(BLAST)

001: MTQVTMEEVW KDINLASLHQ HRHLNIDHEP VLSNQNPNKS IFQDFLNKPL NQEPPPTPSS THHGSLFSPP ATVISLNTHS IDTHFDESAM FGCFGKKRGQ
101: DSDESRGDRR HKRMTKNRES AARSRARKQE RAYINELELE IVHLQKENAR LKRQEEQLKM AEATQHQTKK ILQRSWTSPF

Best Arabidopsis Sequence Match ( AT2G17770.2 )
(BLAST)

001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF

Arabidopsis Description

ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.