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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g061990.2.1
Solyc02g063070.2.1
Solyc02g083520.2.1
Solyc03g034180.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G20370.1 Solyc02g061990.2.1 AT4G35900.1 19656342
AT4G20370.1 Solyc02g083520.2.1 AT4G35900.1 19656342
AT4G20370.1 Solyc02g063070.2.1 AT5G38480.1 23613197
AT4G20370.1 Solyc03g034180.2.1 AT5G38480.1 23613197
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH46900 Soybean cytosol 42.75 63.64
PGSC0003DMT400041725 Potato cytosol 81.68 60.45
Solyc05g055660.1.1 Tomato cytosol 57.25 53.57
Os09t0513500-00 Rice cytosol, extracellular 41.22 53.47
Solyc03g063100.1.1 Tomato cytosol 61.83 45.76
Bra004117.1-P Field mustard cytosol 59.54 44.57
CDY07452 Canola cytosol 59.54 44.57
Solyc05g053850.2.1 Tomato cytosol 58.78 44.0
Solyc11g008640.1.1 Tomato cytosol 58.02 43.68
AT4G20370.1 Thale cress cytosol 57.25 42.86
CDY60941 Canola cytosol 56.49 42.29
CDY16409 Canola cytosol 56.49 42.29
Bra022475.1-P Field mustard cytosol 56.49 42.29
CDY02016 Canola cytosol 54.2 40.57
KRG94768 Soybean cytosol 54.2 40.57
KRH06761 Soybean cytosol 54.2 40.57
KRH01790 Soybean cytosol 54.2 40.34
CDX87561 Canola cytosol 54.2 40.11
KRH01791 Soybean cytosol 52.67 39.88
Zm00001d004630_P001 Maize cytosol 52.67 38.98
KRH46899 Soybean cytosol 51.91 38.86
HORVU4Hr1G089690.1 Barley cytosol 38.93 38.64
GSMUA_Achr9P07900_001 Banana cytosol 51.15 38.51
EES07110 Sorghum cytosol 51.15 38.51
Zm00001d017134_P001 Maize cytosol 51.15 38.51
GSMUA_Achr10P... Banana cytosol 51.91 38.42
Bra015710.1-P Field mustard mitochondrion 45.04 38.31
OQU83339 Sorghum cytosol 51.15 37.85
Zm00001d025737_P001 Maize cytosol 50.38 37.71
GSMUA_Achr3P21510_001 Banana cytosol 49.62 37.57
TraesCS6D01G197100.1 Wheat cytosol 49.62 37.36
TraesCS6B01G244400.1 Wheat cytosol 49.62 37.36
TraesCS6A01G214400.1 Wheat cytosol 49.62 37.36
KRH01789 Soybean cytosol 38.17 37.31
EES11032 Sorghum cytosol 48.85 36.78
Os04t0488400-01 Rice cytosol 48.85 36.78
GSMUA_Achr2P20900_001 Banana cytosol 48.09 36.21
KXG35998 Sorghum cytosol 48.85 35.96
GSMUA_Achr1P17050_001 Banana cytosol 47.33 35.84
TraesCS5B01G020300.1 Wheat cytosol 47.33 35.43
TraesCS5B01G296600.1 Wheat cytosol 48.09 35.39
GSMUA_Achr3P02730_001 Banana cytosol 48.09 35.2
TraesCS4D01G072300.1 Wheat cytosol 48.09 35.2
TraesCS4B01G073800.1 Wheat cytosol 48.09 35.2
GSMUA_Achr2P05870_001 Banana cytosol 49.62 35.14
TraesCS2A01G485000.1 Wheat cytosol 45.8 35.09
TraesCS2B01G511400.1 Wheat cytosol 45.8 34.88
Solyc06g074350.2.1 Tomato cytosol 46.56 34.86
TraesCS5D01G304400.1 Wheat cytosol 47.33 34.83
AT1G65480.2 Thale cress cytosol 58.02 34.7
TraesCS2D01G485100.1 Wheat cytosol 45.8 34.68
TraesCS2B01G567200.1 Wheat cytosol 45.8 34.68
HORVU2Hr1G117710.1 Barley cytosol 45.8 34.68
CDY13571 Canola cytosol 53.44 34.65
HORVU4Hr1G012200.2 Barley cytosol 47.33 34.64
TraesCS2A01G347000.1 Wheat cytosol 45.8 34.48
TraesCS2B01G365300.1 Wheat cytosol 45.8 34.48
TraesCS2D01G345700.1 Wheat cytosol 45.8 34.48
Os12t0232300-00 Rice cytosol 46.56 34.46
HORVU2Hr1G108520.1 Barley cytosol 45.04 34.3
Zm00001d024023_P001 Maize cytosol 45.8 34.29
Solyc03g026050.2.1 Tomato cytosol 45.8 34.29
TraesCS2B01G567400.1 Wheat cytosol 45.04 34.1
HORVU2Hr1G084540.1 Barley cytosol 45.04 33.91
EES16923 Sorghum cytosol 45.8 33.9
TraesCS3D01G011600.1 Wheat cytosol 45.04 33.71
Os11t0293800-00 Rice cytosol 48.85 33.68
TraesCS2A01G536700.1 Wheat cytosol 44.27 33.53
TraesCS2D01G538100.1 Wheat cytosol 44.27 33.53
TraesCS2A01G536900.1 Wheat cytosol 44.27 33.53
TraesCS2A01G536600.1 Wheat cytosol 44.27 33.53
TraesCS3D01G011700.1 Wheat cytosol 44.27 33.14
TraesCS2D01G538000.1 Wheat cytosol 38.17 32.89
HORVU5Hr1G048110.1 Barley cytosol 44.27 32.58
TraesCS3B01G015700.1 Wheat cytosol 43.51 32.57
TraesCS3D01G011500.1 Wheat cytosol 43.51 32.57
TraesCSU01G045800.1 Wheat cytosol 43.51 32.57
TraesCS3B01G015200.1 Wheat cytosol 43.51 32.57
TraesCS3A01G013100.1 Wheat cytosol 43.51 32.57
Solyc09g009560.1.1 Tomato cytosol 42.75 32.56
TraesCS5B01G152800.1 Wheat cytosol 43.51 32.02
TraesCS5D01G159500.1 Wheat cytosol 43.51 32.02
TraesCS3B01G015800.1 Wheat cytosol 42.75 32.0
TraesCS3B01G015600.2 Wheat cytosol 42.75 32.0
HORVU3Hr1G002020.1 Barley cytosol 41.98 31.61
TraesCS5A01G154600.1 Wheat cytosol 42.75 31.46
Solyc01g009560.1.1 Tomato cytosol 41.22 30.86
Solyc03g119100.1.1 Tomato cytosol 39.69 30.06
TraesCS5A01G297300.1 Wheat cytosol 46.56 29.9
Zm00001d006116_P001 Maize cytosol 48.09 28.9
Solyc02g079290.2.1 Tomato cytosol 37.4 27.53
Zm00001d003226_P001 Maize cytosol 32.06 27.1
Solyc01g009580.1.1 Tomato plastid 42.75 25.23
CDY39282 Canola cytosol, mitochondrion, nucleus 22.14 25.0
CDY65847 Canola cytosol 26.72 24.65
Solyc11g008650.1.1 Tomato mitochondrion 6.87 12.33
Protein Annotations
MapMan:27.8.1Gene3D:3.90.280.10InterPro:FTGO:GO:0000003GO:GO:0003674GO:GO:0005488
GO:GO:0007275GO:GO:0008150GO:GO:0008289GO:GO:0008429GO:GO:0009628GO:GO:0009791
GO:GO:0009908GO:GO:0009909GO:GO:0048573InterPro:IPR036610UniProt:K4D5C6InterPro:PEBP
InterPro:PEBP-like_sfInterPro:PEBP_eukPFAM:PF01161ScanProsite:PS01220PANTHER:PTHR11362PANTHER:PTHR11362:SF21
InterPro:Phosphotidylethanolamine-bd_CSSUPFAM:SSF49777EnsemblPlantsGene:Solyc11g008660.1EnsemblPlants:Solyc11g008660.1.1UniParc:UPI000276AA54SEG:seg
Description
No Description!
Coordinates
chr11:-:2838392..2839429
Molecular Weight (calculated)
14936.8 Da
IEP (calculated)
6.239
GRAVY (calculated)
-0.044
Length
131 amino acids
Sequence
(BLAST)
001: MSSIRGRDTL ELGGVISDVL DPFTRSINLS VVYNHREVIN GTNLRPSQIT NQPRVEVGGN DLSTFYTLIV VDPDAPSPSN PNLREYLHWL VTDIPATTGV
101: TFGKFFFFKK NLLLLIMQYL YISFHSNDYF Y
Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.