Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G015700.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 64.57 | 85.61 |
| Zm00001d024023_P001 | Maize | cytosol | 68.57 | 68.57 |
| EES16923 | Sorghum | cytosol | 66.86 | 66.1 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 57.71 | 58.05 |
| AT4G20370.1 | Thale cress | cytosol | 57.71 | 57.71 |
| CDX87561 | Canola | cytosol | 57.14 | 56.5 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 56.0 | 56.32 |
| KRG94768 | Soybean | cytosol | 56.0 | 56.0 |
| CDY07452 | Canola | cytosol | 55.43 | 55.43 |
| Bra022475.1-P | Field mustard | cytosol | 55.43 | 55.43 |
| CDY60941 | Canola | cytosol | 55.43 | 55.43 |
| Bra004117.1-P | Field mustard | cytosol | 55.43 | 55.43 |
| CDY16409 | Canola | cytosol | 55.43 | 55.43 |
| PGSC0003DMT400060057 | Potato | cytosol | 54.29 | 54.91 |
| Solyc05g053850.2.1 | Tomato | cytosol | 54.86 | 54.86 |
| KRH06761 | Soybean | cytosol | 54.86 | 54.86 |
| GSMUA_Achr10P... | Banana | cytosol | 55.43 | 54.8 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 56.0 | 54.75 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 57.71 | 54.59 |
| Bra015710.1-P | Field mustard | mitochondrion | 48.0 | 54.55 |
| CDY02016 | Canola | cytosol | 54.29 | 54.29 |
| PGSC0003DMT400041726 | Potato | cytosol | 53.71 | 54.02 |
| PGSC0003DMT400041725 | Potato | cytosol | 53.14 | 52.54 |
| Solyc11g008640.1.1 | Tomato | cytosol | 51.43 | 51.72 |
| KRH46899 | Soybean | cytosol | 51.43 | 51.43 |
| Solyc05g055660.1.1 | Tomato | cytosol | 41.14 | 51.43 |
| KRH46900 | Soybean | cytosol | 25.71 | 51.14 |
| TraesCSU01G130900.1 | Wheat | cytosol | 49.71 | 48.6 |
| KRH01791 | Soybean | cytosol | 48.0 | 48.55 |
| TraesCSU01G130700.1 | Wheat | cytosol | 49.14 | 47.78 |
| KRH01790 | Soybean | cytosol | 48.0 | 47.73 |
| TraesCSU01G202000.1 | Wheat | cytosol | 46.29 | 46.82 |
| TraesCSU01G130800.1 | Wheat | cytosol, nucleus, peroxisome | 48.0 | 46.15 |
| AT1G65480.2 | Thale cress | cytosol | 57.14 | 45.66 |
| KRH01789 | Soybean | cytosol | 34.86 | 45.52 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 29.71 | 44.83 |
| CDY13571 | Canola | cytosol | 51.43 | 44.55 |
| Solyc11g008660.1.1 | Tomato | cytosol | 32.57 | 43.51 |
| CDY65847 | Canola | cytosol | 26.86 | 33.1 |
Protein Annotations
| EnsemblPlants:TraesCSU01G045800.1 | EnsemblPlantsGene:TraesCSU01G045800 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 | ScanProsite:PS01220 |
| SEG:seg | SUPFAM:SSF49777 | TIGR:cd00866 | MapMan:27.8.1 | : | : |
Description
No Description!
Coordinates
chrUn:+:35827787..35829332
Molecular Weight (calculated)
19275.8 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.286
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSRDPLIV GGIVGDVVDY FDASARLRVL YGNREITVGS ELRPSQVANQ PTVHITGRAG SLYTLVMVDP DVPGPSDPSE REYLHWVVTD IPEGGDVVRG
101: TEVVAYEKPQ PRTGIHRLTF VVFRHAAQVD MDAPGGRSNF VTRDLAECYK LGAPVAAAYF NCQREGSCGG RRWQW
101: TEVVAYEKPQ PRTGIHRLTF VVFRHAAQVD MDAPGGRSNF VTRDLAECYK LGAPVAAAYF NCQREGSCGG RRWQW
001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
Arabidopsis Description
MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.