Factsheet for Bra015710.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010504.1-P
Bra011648.1-P
Bra017735.1-P
Bra028187.1-P
Bra028409.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20370.1	Bra010504.1-P	AT4G35900.1	19656342
AT4G20370.1	Bra011648.1-P	AT4G35900.1	19656342
AT4G20370.1	Bra017735.1-P	AT4G35900.1	19656342
AT4G20370.1	Bra028187.1-P	AT5G38480.1	23613197
AT4G20370.1	Bra028409.1-P	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87561	Canola	cytosol	100.0	87.01
AT4G20370.1	Thale cress	cytosol	82.47	72.57
Bra004117.1-P	Field mustard	cytosol	80.52	70.86
Bra022475.1-P	Field mustard	cytosol	80.52	70.86
TraesCS2D01G538000.1	Wheat	cytosol	61.69	62.5
PGSC0003DMT400060057	Potato	cytosol	69.48	61.85
PGSC0003DMT400041725	Potato	cytosol	70.13	61.02
KRH06761	Soybean	cytosol	68.83	60.57
KRG94768	Soybean	cytosol	68.83	60.57
PGSC0003DMT400041726	Potato	cytosol	67.53	59.77
EES11032	Sorghum	cytosol	66.88	59.2
OQU83339	Sorghum	cytosol	67.53	58.76
Solyc05g055660.1.1	Tomato	cytosol	53.25	58.57
Zm00001d025737_P001	Maize	cytosol	66.23	58.29
Solyc11g008640.1.1	Tomato	cytosol	65.58	58.05
Zm00001d004630_P001	Maize	cytosol	66.23	57.63
EES07110	Sorghum	cytosol	64.29	56.9
Os04t0488400-01	Rice	cytosol	64.29	56.9
Zm00001d017134_P001	Maize	cytosol	64.29	56.9
TraesCS4D01G072300.1	Wheat	cytosol	65.58	56.42
TraesCS2A01G347000.1	Wheat	cytosol	63.64	56.32
TraesCS2B01G365300.1	Wheat	cytosol	63.64	56.32
HORVU2Hr1G084540.1	Barley	cytosol	63.64	56.32
TraesCS2D01G345700.1	Wheat	cytosol	63.64	56.32
Solyc05g053850.2.1	Tomato	cytosol	63.64	56.0
TraesCS4B01G073800.1	Wheat	cytosol	64.94	55.87
HORVU4Hr1G012200.2	Barley	cytosol	64.94	55.87
GSMUA_Achr2P20900_001	Banana	cytosol	62.99	55.75
TraesCS2A01G485000.1	Wheat	cytosol	61.69	55.56
KRH01791	Soybean	cytosol	62.34	55.49
GSMUA_Achr3P21510_001	Banana	cytosol	62.34	55.49
TraesCS2B01G511400.1	Wheat	cytosol	61.69	55.23
TraesCS6D01G197100.1	Wheat	cytosol	62.34	55.17
TraesCS6B01G244400.1	Wheat	cytosol	62.34	55.17
TraesCS6A01G214400.1	Wheat	cytosol	62.34	55.17
TraesCS2D01G538100.1	Wheat	cytosol	61.69	54.91
HORVU2Hr1G117710.1	Barley	cytosol	61.69	54.91
TraesCS2A01G536600.1	Wheat	cytosol	61.69	54.91
TraesCS2A01G536700.1	Wheat	cytosol	61.69	54.91
TraesCS2D01G485100.1	Wheat	cytosol	61.69	54.91
TraesCS2A01G536900.1	Wheat	cytosol	61.69	54.91
TraesCS2B01G567200.1	Wheat	cytosol	61.69	54.91
HORVU2Hr1G108520.1	Barley	cytosol	61.04	54.65
GSMUA_Achr9P07900_001	Banana	cytosol	61.69	54.6
TraesCS2B01G567400.1	Wheat	cytosol	61.04	54.34
Zm00001d024023_P001	Maize	cytosol	61.69	54.29
GSMUA_Achr2P05870_001	Banana	cytosol	64.94	54.05
GSMUA_Achr1P17050_001	Banana	cytosol	60.39	53.76
KRH46899	Soybean	cytosol	61.04	53.71
Os11t0293800-00	Rice	cytosol	66.23	53.68
GSMUA_Achr10P...	Banana	cytosol	61.69	53.67
EES16923	Sorghum	cytosol	61.69	53.67
KRH01790	Soybean	cytosol	61.04	53.41
TraesCS5B01G020300.1	Wheat	cytosol	60.39	53.14
GSMUA_Achr3P02730_001	Banana	cytosol	61.69	53.07
Os12t0232300-00	Rice	cytosol	60.39	52.54
TraesCS3A01G013100.1	Wheat	cytosol	59.09	52.0
HORVU3Hr1G002020.1	Barley	cytosol	58.44	51.72
TraesCS5D01G304400.1	Wheat	cytosol	59.74	51.69
TraesCS5B01G152800.1	Wheat	cytosol	59.74	51.69
TraesCS5D01G159500.1	Wheat	cytosol	59.74	51.69
HORVU5Hr1G048110.1	Barley	cytosol	59.74	51.69
TraesCS5B01G296600.1	Wheat	cytosol	59.74	51.69
KXG35998	Sorghum	cytosol	59.74	51.69
TraesCS5A01G154600.1	Wheat	cytosol	59.74	51.69
TraesCS3D01G011500.1	Wheat	cytosol	58.44	51.43
TraesCS3D01G011600.1	Wheat	cytosol	58.44	51.43
Zm00001d003226_P001	Maize	cytosol	51.3	50.97
TraesCS3B01G015600.2	Wheat	cytosol	57.79	50.86
TraesCS3B01G015200.1	Wheat	cytosol	57.14	50.29
TraesCS3D01G011700.1	Wheat	cytosol	57.14	50.29
TraesCS3B01G015800.1	Wheat	cytosol	57.14	50.29
Bra010052.1-P	Field mustard	cytosol	57.79	50.28
Bra012010.1-P	Field mustard	cytosol	55.19	48.57
TraesCSU01G045800.1	Wheat	cytosol	54.55	48.0
Bra000506.1-P	Field mustard	cytosol	54.55	48.0
TraesCS3B01G015700.1	Wheat	cytosol	54.55	48.0
Bra034357.1-P	Field mustard	cytosol	54.55	48.0
Bra005783.1-P	Field mustard	cytosol	53.25	46.33
HORVU4Hr1G089690.1	Barley	cytosol	39.61	46.21
Bra028815.1-P	Field mustard	cytosol	52.6	45.25
Solyc11g008660.1.1	Tomato	cytosol	38.31	45.04
Bra009508.1-P	Field mustard	cytosol	51.95	44.94
TraesCS5A01G297300.1	Wheat	cytosol	59.09	44.61
Os09t0513500-00	Rice	cytosol, extracellular	28.57	43.56
KRH46900	Soybean	cytosol	24.68	43.18
Zm00001d006116_P001	Maize	cytosol	60.39	42.66
KRH01789	Soybean	cytosol	35.06	40.3
Bra031016.1-P	Field mustard	cytosol	44.16	39.31
Bra025930.1-P	Field mustard	cytosol	43.51	38.73
CDY65847	Canola	cytosol	33.12	35.92

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	EnsemblPlantsGene:Bra015710	EnsemblPlants:Bra015710.1	EnsemblPlants:Bra015710.1-P	InterPro:FT
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150	GO:GO:0008289
GO:GO:0008429	GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009911
GO:GO:0048573	InterPro:IPR036610	UniProt:M4DGT4	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk
PFAM:PF01161	ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777
UniParc:UPI0002541A2E	:	:	:	:	:

Description

AT4G20370 (E=3e-074) TSF | TSF (TWIN SISTER OF FT); phosphatidylethanolamine binding

Coordinates

chrA07:-:21230841..21232523

Molecular Weight (calculated)

17581.9 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.407

Length

154 amino acids

Sequence
(BLAST)

001: MRLISLNVTY GQRQITNGMD LRSSQVLNKP TVEIGGDDLR NFYTLVMVDP DVPSPSNPYL REYLHWLVTD IPATTGTSFG NELVYYENPC PTSGIHRVAL
101: ILFRQLGRQT VYAPQWRQRF NTREFAENYN LGLPVAAVYF NCQRENGCGG RRTS

Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)

001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.