Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G007370.1 | |
| HORVU4Hr1G031770.1 | |
| HORVU4Hr1G043300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | HORVU4Hr1G007370.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G031770.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G043300.1 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G511400.1 | Wheat | cytosol | 97.09 | 97.09 |
| TraesCS2A01G485000.1 | Wheat | cytosol | 95.93 | 96.49 |
| TraesCS2D01G485100.1 | Wheat | cytosol | 95.35 | 94.8 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 87.21 | 86.71 |
| HORVU3Hr1G002020.1 | Barley | cytosol | 86.05 | 85.06 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 62.21 | 81.06 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 76.16 | 73.6 |
| Zm00001d024023_P001 | Maize | cytosol | 74.42 | 73.14 |
| EES16923 | Sorghum | cytosol | 72.67 | 70.62 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 63.95 | 63.22 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 63.37 | 62.64 |
| HORVU4Hr1G012200.2 | Barley | cytosol | 65.12 | 62.57 |
| GSMUA_Achr10P... | Banana | cytosol | 63.37 | 61.58 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 62.21 | 61.49 |
| Bra015710.1-P | Field mustard | mitochondrion | 54.65 | 61.04 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 63.37 | 60.89 |
| CDX87561 | Canola | cytosol | 62.21 | 60.45 |
| AT4G20370.1 | Thale cress | cytosol | 61.05 | 60.0 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 63.95 | 59.46 |
| HORVU3Hr1G027590.13 | Barley | cytosol | 61.05 | 58.66 |
| KRG94768 | Soybean | cytosol | 59.3 | 58.29 |
| PGSC0003DMT400060057 | Potato | cytosol | 58.14 | 57.8 |
| CDY02016 | Canola | cytosol | 58.72 | 57.71 |
| KRH06761 | Soybean | cytosol | 58.72 | 57.71 |
| HORVU3Hr1G087100.1 | Barley | cytosol | 59.88 | 57.54 |
| HORVU7Hr1G024610.1 | Barley | cytosol | 59.88 | 57.54 |
| CDY60941 | Canola | cytosol | 58.14 | 57.14 |
| Bra022475.1-P | Field mustard | cytosol | 58.14 | 57.14 |
| CDY16409 | Canola | cytosol | 58.14 | 57.14 |
| Solyc05g053850.2.1 | Tomato | cytosol | 57.56 | 56.57 |
| Bra004117.1-P | Field mustard | cytosol | 57.56 | 56.57 |
| CDY07452 | Canola | cytosol | 57.56 | 56.57 |
| KRH46899 | Soybean | cytosol | 56.98 | 56.0 |
| PGSC0003DMT400041726 | Potato | cytosol | 56.4 | 55.75 |
| Solyc05g055660.1.1 | Tomato | cytosol | 44.77 | 55.0 |
| Solyc11g008640.1.1 | Tomato | cytosol | 55.23 | 54.6 |
| PGSC0003DMT400041725 | Potato | cytosol | 55.23 | 53.67 |
| KRH01791 | Soybean | cytosol | 53.49 | 53.18 |
| KRH46900 | Soybean | cytosol | 26.16 | 51.14 |
| KRH01790 | Soybean | cytosol | 50.58 | 49.43 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 50.0 | 49.14 |
| AT1G65480.2 | Thale cress | cytosol | 61.63 | 48.4 |
| HORVU1Hr1G076430.1 | Barley | cytosol | 50.58 | 48.33 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 32.56 | 48.28 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 48.26 | 47.98 |
| HORVU4Hr1G090390.1 | Barley | cytosol, nucleus, peroxisome | 48.84 | 47.46 |
| CDY13571 | Canola | cytosol | 55.23 | 47.03 |
| KRH01789 | Soybean | cytosol | 35.47 | 45.52 |
| Solyc11g008660.1.1 | Tomato | cytosol | 34.3 | 45.04 |
| HORVU2Hr1G023180.2 | Barley | cytosol | 46.51 | 43.01 |
| HORVU7Hr1G046660.6 | Barley | cytosol | 43.6 | 41.21 |
| HORVU3Hr1G001000.2 | Barley | cytosol | 45.93 | 40.93 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 41.28 | 34.98 |
| CDY65847 | Canola | cytosol | 25.0 | 30.28 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G108520.1 | EnsemblPlantsGene:HORVU2Hr1G108520 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 | ScanProsite:PS01220 |
| SEG:seg | SUPFAM:SSF49777 | UniParc:UPI000B467D9D | UniProt:A0A287JDL6 | MapMan:27.8.1 | : |
Description
No Description!
Coordinates
chrchr2H:+:714607203..714608629
Molecular Weight (calculated)
19119.6 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.282
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRDPLIVGM IVGDIVDYFD ASARLRVLYS NREITNGSEL RPSQVANQPT VQITGRPGSL YTLVMVDPDV PSPSDPSQRE YLHWLVTDIP ERGDVSCGTE
101: VVAYERPQPT AGIHRVAFVV FRQTAQQAIY APGWRSNFVT RDMAECYSLG APVAAAYFNC QREGSCGGRR YR
101: VVAYERPQPT AGIHRVAFVV FRQTAQQAIY APGWRSNFVT RDMAECYSLG APVAAAYFNC QREGSCGGRR YR
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.