Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G007370.1 | |
| HORVU4Hr1G031770.1 | |
| HORVU4Hr1G043300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | HORVU4Hr1G007370.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G031770.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G043300.1 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G072300.1 | Wheat | cytosol | 98.32 | 98.32 |
| TraesCS4B01G073800.1 | Wheat | cytosol | 97.21 | 97.21 |
| OQU83339 | Sorghum | cytosol | 86.59 | 87.57 |
| Zm00001d004630_P001 | Maize | cytosol | 84.92 | 85.88 |
| Os11t0293800-00 | Rice | cytosol | 84.36 | 79.47 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 74.86 | 77.01 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 74.86 | 77.01 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 73.74 | 75.86 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 74.86 | 74.86 |
| GSMUA_Achr10P... | Banana | cytosol | 73.74 | 74.58 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 74.86 | 72.43 |
| AT4G20370.1 | Thale cress | cytosol | 65.36 | 66.86 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 65.92 | 66.29 |
| KRH06761 | Soybean | cytosol | 64.8 | 66.29 |
| HORVU7Hr1G024610.1 | Barley | cytosol | 65.36 | 65.36 |
| HORVU3Hr1G087100.1 | Barley | cytosol | 65.36 | 65.36 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 62.57 | 65.12 |
| Bra015710.1-P | Field mustard | mitochondrion | 55.87 | 64.94 |
| CDY60941 | Canola | cytosol | 63.13 | 64.57 |
| Bra004117.1-P | Field mustard | cytosol | 63.13 | 64.57 |
| Bra022475.1-P | Field mustard | cytosol | 63.13 | 64.57 |
| CDY16409 | Canola | cytosol | 63.13 | 64.57 |
| CDY07452 | Canola | cytosol | 63.13 | 64.57 |
| CDX87561 | Canola | cytosol | 63.69 | 64.41 |
| PGSC0003DMT400060057 | Potato | cytosol | 62.01 | 64.16 |
| KRG94768 | Soybean | cytosol | 62.57 | 64.0 |
| CDY02016 | Canola | cytosol | 62.01 | 63.43 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 60.34 | 62.43 |
| Solyc05g055660.1.1 | Tomato | cytosol | 48.6 | 62.14 |
| HORVU3Hr1G002020.1 | Barley | cytosol | 59.78 | 61.49 |
| HORVU3Hr1G027590.13 | Barley | cytosol | 61.45 | 61.45 |
| KRH01790 | Soybean | cytosol | 60.34 | 61.36 |
| KRH01791 | Soybean | cytosol | 59.22 | 61.27 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 39.11 | 60.34 |
| KRH46899 | Soybean | cytosol | 58.66 | 60.0 |
| PGSC0003DMT400041725 | Potato | cytosol | 58.1 | 58.76 |
| Solyc05g053850.2.1 | Tomato | cytosol | 56.42 | 57.71 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 42.46 | 57.58 |
| Solyc11g008640.1.1 | Tomato | cytosol | 55.87 | 57.47 |
| PGSC0003DMT400041726 | Potato | cytosol | 55.31 | 56.9 |
| KRH46900 | Soybean | cytosol | 27.37 | 55.68 |
| HORVU1Hr1G076430.1 | Barley | cytosol | 55.31 | 55.0 |
| HORVU4Hr1G090390.1 | Barley | cytosol, nucleus, peroxisome | 53.63 | 54.24 |
| AT1G65480.2 | Thale cress | cytosol | 64.8 | 52.97 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 50.28 | 52.02 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 50.84 | 52.0 |
| CDY13571 | Canola | cytosol | 58.1 | 51.49 |
| HORVU2Hr1G023180.2 | Barley | cytosol | 50.84 | 48.92 |
| KRH01789 | Soybean | cytosol | 35.75 | 47.76 |
| Solyc11g008660.1.1 | Tomato | cytosol | 34.64 | 47.33 |
| HORVU7Hr1G046660.6 | Barley | cytosol | 44.13 | 43.41 |
| HORVU3Hr1G001000.2 | Barley | cytosol | 45.81 | 42.49 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 43.58 | 38.42 |
| CDY65847 | Canola | cytosol | 25.7 | 32.39 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G012200.2 | EnsemblPlantsGene:HORVU4Hr1G012200 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF29 | PFAM:PF01161 | ScanProsite:PS01220 |
| SUPFAM:SSF49777 | UniParc:UPI0002957636 | UniProt:M0X637 | MapMan:27.8.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:39598115..39600317
Molecular Weight (calculated)
20209.2 Da
IEP (calculated)
8.826
GRAVY (calculated)
-0.294
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMINMSRDP LVVGHIVGDI VDPFMTTASL RIFFNNKELT NGSELKPSQV FNVPRVYIGG RDMRNLYTLV MVDPDSPSPS NPTKRENLHW LVTDIPETTD
101: ASFGNEIVPY ESPRPTAGIH RFVFILFKQS VRQTTYAPGW RANFCTRDFA AIYNLGPPVA GMYFNCQREN GCGGRRSIR
101: ASFGNEIVPY ESPRPTAGIH RFVFILFKQS VRQTTYAPGW RANFCTRDFA AIYNLGPPVA GMYFNCQREN GCGGRRSIR
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.