Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G007370.1 | |
| HORVU4Hr1G031770.1 | |
| HORVU4Hr1G043300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | HORVU4Hr1G007370.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G031770.1 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | HORVU4Hr1G043300.1 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G013100.1 | Wheat | cytosol | 90.15 | 68.0 |
| TraesCS3D01G011500.1 | Wheat | cytosol | 88.64 | 66.86 |
| TraesCS3B01G015200.1 | Wheat | cytosol | 88.64 | 66.86 |
| TraesCS3B01G015600.2 | Wheat | cytosol | 87.88 | 66.29 |
| TraesCSU01G045800.1 | Wheat | cytosol | 85.61 | 64.57 |
| TraesCS3B01G015700.1 | Wheat | cytosol | 85.61 | 64.57 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 81.06 | 62.21 |
| HORVU3Hr1G002020.1 | Barley | cytosol | 81.82 | 62.07 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 81.06 | 61.85 |
| Zm00001d024023_P001 | Maize | cytosol | 71.21 | 53.71 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 68.18 | 50.56 |
| EES16923 | Sorghum | cytosol | 67.42 | 50.28 |
| Solyc05g055660.1.1 | Tomato | cytosol | 53.03 | 50.0 |
| KRH46900 | Soybean | cytosol | 32.58 | 48.86 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 59.09 | 44.83 |
| AT4G20370.1 | Thale cress | cytosol | 58.33 | 44.0 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 57.58 | 43.68 |
| Bra022475.1-P | Field mustard | cytosol | 57.58 | 43.43 |
| CDY16409 | Canola | cytosol | 57.58 | 43.43 |
| KRG94768 | Soybean | cytosol | 57.58 | 43.43 |
| CDY60941 | Canola | cytosol | 57.58 | 43.43 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 58.33 | 43.02 |
| GSMUA_Achr10P... | Banana | cytosol | 57.58 | 42.94 |
| CDX87561 | Canola | cytosol | 57.58 | 42.94 |
| HORVU4Hr1G012200.2 | Barley | cytosol | 57.58 | 42.46 |
| Bra004117.1-P | Field mustard | cytosol | 56.06 | 42.29 |
| KRH06761 | Soybean | cytosol | 56.06 | 42.29 |
| CDY07452 | Canola | cytosol | 56.06 | 42.29 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 59.09 | 42.16 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 55.3 | 41.95 |
| CDY02016 | Canola | cytosol | 55.3 | 41.71 |
| HORVU3Hr1G027590.13 | Barley | cytosol | 56.06 | 41.34 |
| PGSC0003DMT400060057 | Potato | cytosol | 53.79 | 41.04 |
| PGSC0003DMT400041726 | Potato | cytosol | 53.79 | 40.8 |
| HORVU3Hr1G087100.1 | Barley | cytosol | 54.55 | 40.22 |
| HORVU7Hr1G024610.1 | Barley | cytosol | 54.55 | 40.22 |
| Solyc05g053850.2.1 | Tomato | cytosol | 53.03 | 40.0 |
| Bra015710.1-P | Field mustard | mitochondrion | 46.21 | 39.61 |
| Solyc11g008660.1.1 | Tomato | cytosol | 38.64 | 38.93 |
| Solyc11g008640.1.1 | Tomato | cytosol | 50.76 | 38.51 |
| PGSC0003DMT400041725 | Potato | cytosol | 50.0 | 37.29 |
| AT1G65480.2 | Thale cress | cytosol | 59.85 | 36.07 |
| KRH46899 | Soybean | cytosol | 47.73 | 36.0 |
| KRH01791 | Soybean | cytosol | 46.97 | 35.84 |
| KRH01790 | Soybean | cytosol | 46.21 | 34.66 |
| CDY13571 | Canola | cytosol | 53.03 | 34.65 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 45.45 | 34.29 |
| HORVU3Hr1G001000.2 | Barley | cytosol | 49.24 | 33.68 |
| HORVU1Hr1G076430.1 | Barley | cytosol | 45.45 | 33.33 |
| HORVU4Hr1G090390.1 | Barley | cytosol, nucleus, peroxisome | 44.7 | 33.33 |
| HORVU7Hr1G046660.6 | Barley | cytosol | 45.45 | 32.97 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 42.42 | 32.37 |
| HORVU2Hr1G023180.2 | Barley | cytosol | 43.94 | 31.18 |
| KRH01789 | Soybean | cytosol | 31.06 | 30.6 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 25.0 | 28.45 |
| CDY65847 | Canola | cytosol | 30.3 | 28.17 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 40.91 | 26.6 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089690.1 | EnsemblPlantsGene:HORVU4Hr1G089690 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 | SEG:seg | SUPFAM:SSF49777 |
| UniParc:UPI000B4803B7 | UniProt:A0A287Q3K7 | MapMan:27.8.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:643399880..643401686
Molecular Weight (calculated)
14626.5 Da
IEP (calculated)
5.661
GRAVY (calculated)
-0.081
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: LRSRDPLIVG RIVGDVVDYF DASARLKVLY GNREMTVGSE LRTSQVANQP TVRITGRAGS LYTLVMVDPD VPRPSDPSER EYLHWLVTDI PEGGEVGLGT
101: EVVAYEKPEP TVGIHRLVFV VFRQAAGWCH CC
101: EVVAYEKPEP TVGIHRLVFV VFRQAAGWCH CC
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.