Factsheet for GSMUA_Achr9P07900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P02630_001
GSMUA_Achr1P02640_001
GSMUA_Achr2P03490_001
GSMUA_Achr2P11200_001
GSMUA_Achr4P05090_001
GSMUA_Achr4P29580_001
GSMUA_Achr5P11220_001
GSMUA_Achr5P11470_001
GSMUA_Achr5P17850_001
GSMUA_Achr5P23090_001
GSMUA_Achr9P21040_001
GSMUA_Achr9P24090_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20370.1	GSMUA_Achr1P02630_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr1P02640_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr2P03490_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr2P11200_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr4P05090_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr4P29580_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr5P11220_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr5P11470_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr5P17850_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr9P21040_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr9P24090_001	AT4G35900.1	19656342
AT4G20370.1	GSMUA_Achr5P23090_001	AT5G38480.1	23613197
AT4G20370.1	GSMUA_AchrUn_...	AT5G38480.1	23613197
AT4G20370.1	GSMUA_AchrUn_...	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05870_001	Banana	cytosol	89.08	83.78
EES07110	Sorghum	cytosol	82.18	82.18
GSMUA_Achr2P20900_001	Banana	cytosol	82.18	82.18
GSMUA_Achr3P02730_001	Banana	cytosol	84.48	82.12
GSMUA_Achr10P...	Banana	cytosol	82.76	81.36
Zm00001d017134_P001	Maize	cytosol	81.03	81.03
EES11032	Sorghum	cytosol	80.46	80.46
Zm00001d025737_P001	Maize	cytosol	79.31	78.86
Os04t0488400-01	Rice	cytosol	78.74	78.74
OQU83339	Sorghum	cytosol	79.89	78.53
TraesCS6D01G197100.1	Wheat	cytosol	78.16	78.16
TraesCS2B01G365300.1	Wheat	cytosol	78.16	78.16
TraesCS6B01G244400.1	Wheat	cytosol	78.16	78.16
TraesCS6A01G214400.1	Wheat	cytosol	78.16	78.16
TraesCS2D01G345700.1	Wheat	cytosol	77.59	77.59
TraesCS2A01G347000.1	Wheat	cytosol	77.59	77.59
Zm00001d004630_P001	Maize	cytosol	78.74	77.4
HORVU2Hr1G084540.1	Barley	cytosol	76.44	76.44
TraesCS4D01G072300.1	Wheat	cytosol	77.01	74.86
TraesCS4B01G073800.1	Wheat	cytosol	76.44	74.3
HORVU4Hr1G012200.2	Barley	cytosol	75.86	73.74
Os11t0293800-00	Rice	cytosol	80.46	73.68
Zm00001d003226_P001	Maize	cytosol	65.52	73.55
GSMUA_Achr3P21510_001	Banana	cytosol	72.41	72.83
TraesCS5B01G020300.1	Wheat	cytosol	72.41	72.0
KRH06761	Soybean	cytosol	70.69	70.29
Zm00001d024023_P001	Maize	cytosol	70.11	69.71
Os12t0232300-00	Rice	cytosol	70.69	69.49
GSMUA_Achr2P19310_001	Banana	cytosol	69.54	69.14
GSMUA_Achr1P17050_001	Banana	cytosol	68.39	68.79
GSMUA_Achr10P...	Banana	cytosol	68.39	68.39
KRG94768	Soybean	cytosol	68.39	68.0
GSMUA_Achr10P...	Banana	cytosol	68.97	67.8
PGSC0003DMT400060057	Potato	cytosol	67.24	67.63
Bra004117.1-P	Field mustard	cytosol	67.24	66.86
Bra022475.1-P	Field mustard	cytosol	67.24	66.86
CDY07452	Canola	cytosol	67.24	66.86
CDY16409	Canola	cytosol	67.24	66.86
CDY60941	Canola	cytosol	67.24	66.86
Solyc05g055660.1.1	Tomato	cytosol	53.45	66.43
AT4G20370.1	Thale cress	cytosol	66.67	66.29
EES16923	Sorghum	cytosol	67.24	66.1
GSMUA_Achr4P08540_001	Banana	cytosol	67.24	65.36
HORVU5Hr1G048110.1	Barley	cytosol	64.94	63.48
TraesCS2A01G485000.1	Wheat	cytosol	62.07	63.16
KRH01790	Soybean	cytosol	63.79	63.07
TraesCS5D01G159500.1	Wheat	cytosol	64.37	62.92
TraesCS2B01G511400.1	Wheat	cytosol	62.07	62.79
PGSC0003DMT400041725	Potato	cytosol	63.79	62.71
Solyc11g008640.1.1	Tomato	cytosol	62.64	62.64
KRH01791	Soybean	cytosol	62.07	62.43
TraesCS2D01G485100.1	Wheat	cytosol	62.07	62.43
TraesCS5B01G152800.1	Wheat	cytosol	63.79	62.36
TraesCS5A01G154600.1	Wheat	cytosol	63.79	62.36
HORVU2Hr1G108520.1	Barley	cytosol	61.49	62.21
PGSC0003DMT400041726	Potato	cytosol	62.07	62.07
CDY02016	Canola	cytosol	62.07	61.71
GSMUA_Achr5P06600_001	Banana	cytosol	62.07	61.71
GSMUA_Achr5P06420_001	Banana	cytosol	62.07	61.71
Bra015710.1-P	Field mustard	mitochondrion	54.6	61.69
Solyc05g053850.2.1	Tomato	cytosol	61.49	61.14
CDX87561	Canola	cytosol	62.07	61.02
TraesCS2B01G567400.1	Wheat	cytosol	60.34	60.69
HORVU2Hr1G117710.1	Barley	cytosol	60.34	60.69
KRH46899	Soybean	cytosol	60.92	60.57
TraesCS2D01G538000.1	Wheat	cytosol	52.87	60.53
CDY39282	Canola	cytosol, mitochondrion, nucleus	40.23	60.34
KRH46900	Soybean	cytosol	30.46	60.23
TraesCS2A01G536600.1	Wheat	cytosol	59.77	60.12
TraesCS2A01G536700.1	Wheat	cytosol	59.77	60.12
TraesCS2A01G536900.1	Wheat	cytosol	59.77	60.12
TraesCS2B01G567200.1	Wheat	cytosol	59.2	59.54
TraesCS2D01G538100.1	Wheat	cytosol	59.2	59.54
GSMUA_Achr11P...	Banana	cytosol	58.62	58.96
GSMUA_Achr5P20040_001	Banana	cytosol	58.05	58.38
TraesCS3D01G011600.1	Wheat	cytosol	58.62	58.29
TraesCS3A01G013100.1	Wheat	cytosol	58.62	58.29
TraesCS3D01G011500.1	Wheat	cytosol	58.62	58.29
GSMUA_Achr2P19360_001	Banana	cytosol	59.2	58.19
TraesCS3B01G015600.2	Wheat	cytosol	58.05	57.71
TraesCS3B01G015200.1	Wheat	cytosol	58.05	57.71
TraesCS3D01G011700.1	Wheat	cytosol	58.05	57.71
HORVU4Hr1G089690.1	Barley	cytosol	43.68	57.58
GSMUA_Achr3P03070_001	Banana	cytosol	56.9	57.23
TraesCS3B01G015800.1	Wheat	cytosol	57.47	57.14
HORVU3Hr1G002020.1	Barley	cytosol	56.9	56.9
TraesCS3B01G015700.1	Wheat	cytosol	56.32	56.0
TraesCSU01G045800.1	Wheat	cytosol	56.32	56.0
GSMUA_Achr8P07730_001	Banana	cytosol	55.17	54.86
GSMUA_Achr10P...	Banana	cytosol	54.6	54.6
AT1G65480.2	Thale cress	cytosol	68.39	54.34
GSMUA_Achr3P22720_001	Banana	cytosol	54.02	54.02
GSMUA_Achr10P...	Banana	cytosol	53.45	53.76
KRH01789	Soybean	cytosol	39.66	51.49
Solyc11g008660.1.1	Tomato	cytosol	38.51	51.15
CDY13571	Canola	cytosol	58.62	50.49
GSMUA_AchrUn_...	Banana	cytosol	49.43	50.0
GSMUA_Achr6P09410_001	Banana	cytosol	48.85	49.42
GSMUA_Achr3P20880_001	Banana	cytosol	48.85	49.42
CDY65847	Canola	cytosol	23.56	28.87

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07900_001	EnsemblPlants:GSMUA_Achr9T07900_001	EnsemblPlantsGene:GSMUA_Achr9G07900_001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF29	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI00029537E4	UniProt:M0TYE9	MapMan:27.8.1	:

Description

Protein HEADING DATE 3A [Source:GMGC_GENE;Acc:GSMUA_Achr9G07900_001]

Coordinates

chr9:-:5067830..5068866

Molecular Weight (calculated)

19567.2 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.372

Length

174 amino acids

Sequence
(BLAST)

001: MSRDPLVVGN VIGDVLDPFV TSAAFRVIYN SKELTNGSEL KPSAVAKEPR VEIRGHDMRT LYTLVMVDPD APSPSNPTKR EHLHWLVTDI PETTNTTFGN
101: EIVCYESPRP TAGIHRFVFV LFRQSVRQTI DAPGWRQNFN TKDFSALYNL GDPVAAMFFN CQRENGCGGR RYTS

Best Arabidopsis Sequence Match ( AT4G20370.1 )
(BLAST)

001: MSLSRRDPLV VGSVVGDVLD PFTRLVSLKV TYGHREVTNG LDLRPSQVLN KPIVEIGGDD FRNFYTLVMV DPDVPSPSNP HQREYLHWLV TDIPATTGNA
101: FGNEVVCYES PRPPSGIHRI VLVLFRQLGR QTVYAPGWRQ QFNTREFAEI YNLGLPVAAS YFNCQRENGC GGRRT

Arabidopsis Description

TSFProtein of the phosphatidylethanolamine-binding protein (PEBP) family [Source:UniProtKB/TrEMBL;Acc:Q587R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.