Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G511400.1 | Wheat | cytosol | 98.25 | 97.67 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 96.49 | 95.93 |
| TraesCS2D01G485100.1 | Wheat | cytosol | 95.91 | 94.8 |
| TraesCS2A01G536600.1 | Wheat | cytosol | 87.72 | 86.71 |
| TraesCS2A01G536700.1 | Wheat | cytosol | 87.72 | 86.71 |
| TraesCS2A01G536900.1 | Wheat | cytosol | 87.72 | 86.71 |
| TraesCS3A01G013100.1 | Wheat | cytosol | 84.8 | 82.86 |
| Zm00001d024023_P001 | Maize | cytosol | 75.44 | 73.71 |
| TraesCS5A01G154600.1 | Wheat | cytosol | 75.44 | 72.47 |
| EES16923 | Sorghum | cytosol | 73.68 | 71.19 |
| TraesCS6A01G214400.1 | Wheat | cytosol | 68.42 | 67.24 |
| TraesCS2A01G347000.1 | Wheat | cytosol | 65.5 | 64.37 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 64.33 | 63.22 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 63.16 | 62.07 |
| Bra015710.1-P | Field mustard | mitochondrion | 55.56 | 61.69 |
| CDX87561 | Canola | cytosol | 63.74 | 61.58 |
| GSMUA_Achr10P... | Banana | cytosol | 63.16 | 61.02 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 63.74 | 60.89 |
| AT4G20370.1 | Thale cress | cytosol | 61.99 | 60.57 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 64.33 | 59.46 |
| KRG94768 | Soybean | cytosol | 60.23 | 58.86 |
| CDY02016 | Canola | cytosol | 60.23 | 58.86 |
| CDY16409 | Canola | cytosol | 59.65 | 58.29 |
| KRH06761 | Soybean | cytosol | 59.65 | 58.29 |
| CDY60941 | Canola | cytosol | 59.65 | 58.29 |
| Bra022475.1-P | Field mustard | cytosol | 59.65 | 58.29 |
| TraesCS7A01G115400.1 | Wheat | cytosol | 59.06 | 57.39 |
| PGSC0003DMT400060057 | Potato | cytosol | 57.89 | 57.23 |
| CDY07452 | Canola | cytosol | 58.48 | 57.14 |
| Bra004117.1-P | Field mustard | cytosol | 58.48 | 57.14 |
| TraesCS3A01G143100.1 | Wheat | cytosol, mitochondrion | 60.23 | 56.59 |
| Solyc05g053850.2.1 | Tomato | cytosol | 57.89 | 56.57 |
| PGSC0003DMT400041726 | Potato | cytosol | 57.31 | 56.32 |
| Solyc05g055660.1.1 | Tomato | cytosol | 45.61 | 55.71 |
| KRH46899 | Soybean | cytosol | 56.73 | 55.43 |
| Solyc11g008640.1.1 | Tomato | cytosol | 56.14 | 55.17 |
| KRH01791 | Soybean | cytosol | 54.97 | 54.34 |
| PGSC0003DMT400041725 | Potato | cytosol | 56.14 | 54.24 |
| KRH46900 | Soybean | cytosol | 25.73 | 50.0 |
| TraesCS6A01G160200.1 | Wheat | cytosol | 53.22 | 49.73 |
| KRH01790 | Soybean | cytosol | 50.88 | 49.43 |
| AT1G65480.2 | Thale cress | cytosol | 63.16 | 49.32 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 49.12 | 48.55 |
| TraesCS2A01G132300.1 | Wheat | cytosol | 49.12 | 48.55 |
| TraesCS7A01G355100.1 | Wheat | cytosol | 28.07 | 48.48 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 32.75 | 48.28 |
| TraesCS5A01G297300.1 | Wheat | cytosol | 57.31 | 48.04 |
| CDY13571 | Canola | cytosol | 56.73 | 48.02 |
| TraesCS1A01G338600.1 | Wheat | cytosol | 49.71 | 47.22 |
| TraesCS5A01G546900.1 | Wheat | cytosol | 49.12 | 47.19 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 47.37 | 46.29 |
| TraesCS5A01G546800.1 | Wheat | cytosol | 49.12 | 46.15 |
| Solyc11g008660.1.1 | Tomato | cytosol | 35.09 | 45.8 |
| TraesCS3A01G006600.1 | Wheat | cytosol | 46.78 | 45.71 |
| TraesCS7A01G229400.1 | Wheat | cytosol, golgi | 47.95 | 45.56 |
| KRH01789 | Soybean | cytosol | 35.09 | 44.78 |
| CDY65847 | Canola | cytosol | 25.73 | 30.99 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G485000.1 | EnsemblPlantsGene:TraesCS2A01G485000 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 | ScanProsite:PS01220 |
| SEG:seg | SUPFAM:SSF49777 | TIGR:cd00866 | MapMan:27.8.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:719993376..719994507
Molecular Weight (calculated)
19042.5 Da
IEP (calculated)
7.922
GRAVY (calculated)
-0.278
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRDPLIVGR IVGDIVDYFD ASARLRVLYS YREITNGSEL RPSQVANQPT VQITGRPGSL YTLVMVDPDV PSPSNPSQRE YLHWLVTDIP ERGDVSCGTE
101: VVPYERPQPT AGIHRVAFVV FRQAAQAIYA PGWRSNFVTR DIAECYSLGA PVAAAYFNCQ REGSCGGRRY R
101: VVPYERPQPT AGIHRVAFVV FRQAAQAIYA PGWRSNFVTR DIAECYSLGA PVAAAYFNCQ REGSCGGRRY R
001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
Arabidopsis Description
MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.