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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67405
CDX69181
CDX72563
CDX74521
CDX75538
CDY01659
CDY24826
CDY47041
CDY62049
CDY71290

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G20370.1 CDX69181 AT4G35900.1 19656342
AT4G20370.1 CDX72563 AT4G35900.1 19656342
AT4G20370.1 CDX75538 AT4G35900.1 19656342
AT4G20370.1 CDY24826 AT4G35900.1 19656342
AT4G20370.1 CDY47041 AT4G35900.1 19656342
AT4G20370.1 CDY62049 AT4G35900.1 19656342
AT4G20370.1 CDX67405 AT5G38480.1 23613197
AT4G20370.1 CDX74521 AT5G38480.1 23613197
AT4G20370.1 CDY01659 AT5G38480.1 23613197
AT4G20370.1 CDY71290 AT5G38480.1 23613197
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87561 Canola cytosol 91.43 90.4
AT4G20370.1 Thale cress cytosol 82.86 82.86
CDY60941 Canola cytosol 81.71 81.71
CDY13571 Canola cytosol 94.29 81.68
CDY16409 Canola cytosol 81.14 81.14
CDY07452 Canola cytosol 78.29 78.29
PGSC0003DMT400060057 Potato cytosol 67.43 68.21
CDY39282 Canola cytosol, mitochondrion, nucleus 45.14 68.1
KRG94768 Soybean cytosol 68.0 68.0
KRH06761 Soybean cytosol 68.0 68.0
PGSC0003DMT400041726 Potato cytosol 66.86 67.24
PGSC0003DMT400041725 Potato cytosol 68.0 67.23
Solyc05g055660.1.1 Tomato cytosol 53.71 67.14
OQU83339 Sorghum cytosol 66.29 65.54
EES11032 Sorghum cytosol 65.14 65.52
Solyc11g008640.1.1 Tomato cytosol 64.57 64.94
Zm00001d025737_P001 Maize cytosol 64.57 64.57
Zm00001d004630_P001 Maize cytosol 65.14 64.41
EES07110 Sorghum cytosol 63.43 63.79
Zm00001d017134_P001 Maize cytosol 63.43 63.79
Solyc05g053850.2.1 Tomato cytosol 63.43 63.43
GSMUA_Achr2P20900_001 Banana cytosol 62.29 62.64
Os04t0488400-01 Rice cytosol 62.29 62.64
GSMUA_Achr3P21510_001 Banana cytosol 61.71 62.43
GSMUA_Achr9P07900_001 Banana cytosol 61.71 62.07
HORVU4Hr1G012200.2 Barley cytosol 63.43 62.01
TraesCS4D01G072300.1 Wheat cytosol 63.43 62.01
GSMUA_Achr1P17050_001 Banana cytosol 61.14 61.85
KRH01791 Soybean cytosol 61.14 61.85
TraesCS6A01G214400.1 Wheat cytosol 61.14 61.49
TraesCS6B01G244400.1 Wheat cytosol 61.14 61.49
TraesCS6D01G197100.1 Wheat cytosol 61.14 61.49
TraesCS4B01G073800.1 Wheat cytosol 62.86 61.45
KRH46899 Soybean cytosol 61.14 61.14
TraesCS2A01G347000.1 Wheat cytosol 60.57 60.92
TraesCS2B01G365300.1 Wheat cytosol 60.57 60.92
TraesCS2D01G345700.1 Wheat cytosol 60.57 60.92
TraesCS2D01G485100.1 Wheat cytosol 60.0 60.69
GSMUA_Achr2P05870_001 Banana cytosol 64.0 60.54
Os11t0293800-00 Rice cytosol 65.71 60.53
TraesCS2D01G538000.1 Wheat cytosol 52.57 60.53
HORVU2Hr1G084540.1 Barley cytosol 60.0 60.34
TraesCS2A01G485000.1 Wheat cytosol 58.86 60.23
TraesCS2A01G536600.1 Wheat cytosol 59.43 60.12
TraesCS2A01G536700.1 Wheat cytosol 59.43 60.12
TraesCS2A01G536900.1 Wheat cytosol 59.43 60.12
TraesCS2D01G538100.1 Wheat cytosol 59.43 60.12
TraesCS5B01G296600.1 Wheat cytosol 61.14 60.11
TraesCS5D01G304400.1 Wheat cytosol 61.14 60.11
Zm00001d024023_P001 Maize cytosol 60.0 60.0
KXG35998 Sorghum cytosol 60.57 59.55
HORVU2Hr1G117710.1 Barley cytosol 58.86 59.54
TraesCS2B01G567200.1 Wheat cytosol 58.86 59.54
TraesCS2B01G567400.1 Wheat cytosol 58.86 59.54
GSMUA_Achr10P... Banana cytosol 60.0 59.32
TraesCS2B01G511400.1 Wheat cytosol 58.29 59.3
GSMUA_Achr3P02730_001 Banana cytosol 60.57 59.22
KRH01790 Soybean cytosol 59.43 59.09
EES16923 Sorghum cytosol 59.43 58.76
Os12t0232300-00 Rice cytosol 59.43 58.76
HORVU2Hr1G108520.1 Barley cytosol 57.71 58.72
Zm00001d003226_P001 Maize cytosol 52.0 58.71
KRH46900 Soybean cytosol 29.14 57.95
TraesCS3A01G013100.1 Wheat cytosol 57.71 57.71
TraesCS3B01G015200.1 Wheat cytosol 57.71 57.71
TraesCS3D01G011500.1 Wheat cytosol 57.71 57.71
TraesCS3D01G011600.1 Wheat cytosol 57.71 57.71
Os09t0513500-00 Rice cytosol, extracellular 33.14 57.43
TraesCS3B01G015600.2 Wheat cytosol 56.57 56.57
TraesCS5B01G020300.1 Wheat cytosol 56.57 56.57
CDX77127 Canola cytosol 37.14 56.52
HORVU3Hr1G002020.1 Barley cytosol 56.0 56.32
TraesCS3D01G011700.1 Wheat cytosol 56.0 56.0
HORVU5Hr1G048110.1 Barley cytosol 56.57 55.62
TraesCS5B01G152800.1 Wheat cytosol 56.57 55.62
TraesCS5D01G159500.1 Wheat cytosol 56.57 55.62
TraesCS3B01G015800.1 Wheat cytosol 55.43 55.43
HORVU4Hr1G089690.1 Barley cytosol 41.71 55.3
TraesCS5A01G154600.1 Wheat cytosol 56.0 55.06
CDY04503 Canola cytosol 54.86 54.86
CDY27416 Canola cytosol 54.86 54.86
CDY30540 Canola cytosol 54.86 54.86
CDY51916 Canola cytosol 54.86 54.86
CDX71440 Canola cytosol 54.29 54.29
CDX83272 Canola cytosol 54.29 54.29
CDY31183 Canola cytosol 54.29 54.29
TraesCS3B01G015700.1 Wheat cytosol 54.29 54.29
TraesCSU01G045800.1 Wheat cytosol 54.29 54.29
Solyc11g008660.1.1 Tomato cytosol 40.57 54.2
CDX80890 Canola cytosol 53.14 53.45
CDY41432 Canola cytosol 52.57 51.69
TraesCS5A01G297300.1 Wheat cytosol 60.0 51.47
CDY04899 Canola cytosol 52.57 51.4
CDY14173 Canola cytosol 52.57 51.4
CDX70281 Canola cytosol 52.0 51.12
KRH01789 Soybean cytosol 37.71 49.25
Zm00001d006116_P001 Maize cytosol 61.14 49.08
CDY65847 Canola cytosol 38.29 47.18
CDX86931 Canola cytosol 54.86 46.38
CDY00248 Canola cytosol 54.86 46.38
CDX81861 Canola cytosol 44.0 44.51
CDY21719 Canola cytosol 44.0 44.51
CDY60777 Canola cytosol 44.0 44.25
CDY26185 Canola cytosol 42.86 43.35
Protein Annotations
MapMan:27.8.1Gene3D:3.90.280.10GO:A0A078ELJ4EnsemblPlants:CDY02016ProteinID:CDY02016ProteinID:CDY02016.1
InterPro:FTGO:GO:0000003GO:GO:0003674GO:GO:0005488GO:GO:0007275GO:GO:0008150
GO:GO:0008289GO:GO:0008429GO:GO:0009628GO:GO:0009791GO:GO:0009908GO:GO:0009909
GO:GO:0048573EnsemblPlantsGene:GSBRNA2T00113342001InterPro:IPR036610InterPro:PEBPInterPro:PEBP-like_sfInterPro:PEBP_euk
PFAM:PF01161ScanProsite:PS01220PANTHER:PTHR11362PANTHER:PTHR11362:SF21InterPro:Phosphotidylethanolamine-bd_CSSUPFAM:SSF49777
UniParc:UPI0004EDB0D8:::::
Description
BnaC04g14850D
Coordinates
chrLK031931:-:316217..318787
Molecular Weight (calculated)
19861.8 Da
IEP (calculated)
7.505
GRAVY (calculated)
-0.271
Length
175 amino acids
Sequence
(BLAST)
001: MSLSPRDPLV LARVVGDVVD PFMRLISLRV NYGQRQVTNG LDLRTSQVLN KPTVEIGGDD LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTA
101: FGNELVHYEN PCPTSGIHRV ALMLFWQLGR QTVYAPEWRQ RFNTREFAEN YNLGLPVAAV FFNCQRENGC GGRRT
Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)
001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.