CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025930.1-P	Field mustard	cytosol	100.0	100.0
CDY60777	Canola	cytosol	97.69	97.13
CDY21719	Canola	cytosol	94.8	94.8
CDX81861	Canola	cytosol	94.22	94.22
AT1G18100.1	Thale cress	cytosol	93.06	93.06
VIT_17s0000g02630.t01	Wine grape	cytosol	76.88	77.33
KRH41796	Soybean	cytosol	39.88	69.7
KRH60500	Soybean	endoplasmic reticulum	74.57	67.89
Solyc03g119100.1.1	Tomato	cytosol	67.63	67.63
PGSC0003DMT400014409	Potato	cytosol	67.63	67.63
GSMUA_AchrUn_...	Banana	cytosol	64.16	64.53
GSMUA_Achr6P09410_001	Banana	cytosol	64.16	64.53
GSMUA_Achr3P20880_001	Banana	cytosol	64.16	64.53
Os06t0498800-01	Rice	cytosol, extracellular, plastid	65.32	64.2
EES02614	Sorghum	cytosol	62.43	63.16
TraesCS7D01G230000.1	Wheat	cytosol	63.58	61.11
TraesCS7B01G195200.1	Wheat	cytosol	63.58	61.11
TraesCS7A01G229400.1	Wheat	cytosol, golgi	63.58	61.11
Zm00001d040113_P003	Maize	cytosol	62.43	60.0
TraesCS3B01G010100.1	Wheat	cytosol	60.12	59.43
TraesCS3B01G007400.1	Wheat	cytosol	57.23	58.58
TraesCS3A01G006600.1	Wheat	cytosol	58.96	58.29
KXG19938	Sorghum	cytosol	60.12	57.46
Os01t0111600-01	Rice	cytosol	57.23	56.9
HORVU7Hr1G046660.6	Barley	cytosol	58.96	56.04
HORVU3Hr1G001000.2	Barley	cytosol	60.12	53.89
TraesCS3D01G004100.1	Wheat	cytosol	59.54	53.09
CDX77127	Canola	cytosol	34.68	52.17
Zm00001d037439_P001	Maize	extracellular	59.54	52.02
Zm00001d008446_P006	Maize	cytosol	62.43	51.92
CDX83272	Canola	cytosol	50.29	49.71
CDY04503	Canola	cytosol	50.29	49.71
CDY51916	Canola	cytosol	50.29	49.71
CDY27416	Canola	cytosol	50.29	49.71
CDY31183	Canola	cytosol	50.29	49.71
CDY30540	Canola	cytosol	50.29	49.71
CDX71440	Canola	cytosol	49.71	49.14
CDX70281	Canola	cytosol	50.29	48.88
CDY41432	Canola	cytosol	50.29	48.88
CDX80890	Canola	cytosol	47.4	47.13
CDY04899	Canola	cytosol	47.4	45.81
CDY14173	Canola	cytosol	47.4	45.81
CDY07452	Canola	cytosol	46.24	45.71
CDX87561	Canola	cytosol	46.24	45.2
CDY60941	Canola	cytosol	45.66	45.14
CDY16409	Canola	cytosol	45.66	45.14
CDY02016	Canola	cytosol	43.35	42.86
CDY00248	Canola	cytosol	49.71	41.55
CDX86931	Canola	cytosol	49.71	41.55
CDY39282	Canola	cytosol, mitochondrion, nucleus	25.43	37.93
CDY13571	Canola	cytosol	41.62	35.64
CDY65847	Canola	cytosol	24.28	29.58

Protein Annotations

EnsemblPlants:CDY26185	EnsemblPlantsGene:GSBRNA2T00034844001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF42	PFAM:PF01161	ProteinID:CDY26185
ProteinID:CDY26185.1	ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0001EECFB1	UniProt:A0A078GIA0	MapMan:27.8.1

Description

BnaA06g12320DBnaA06g12320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIA0]

Coordinates

chrLK032186:+:151617..153700

Molecular Weight (calculated)

18918.1 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.112

Length

173 amino acids

Sequence
(BLAST)

001: MAASVDPLVV GRVIGDVLDM YIPTANMSVY VGPKHITNGC EIKPSAAVKP PKVNISGNPD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSKG
101: KEILPYMEPK PPVGIHRYIF VLFRQISPVG LMVQQPPSRA NFSTRMFAGH LDLGLPVATV YFNAQKEPAS GRR

Best Arabidopsis Sequence Match ( AT1G18100.1 )
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR

Arabidopsis Description

MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.