Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034357.1-P | Field mustard | cytosol | 94.78 | 62.29 |
| CDY27416 | Canola | cytosol | 94.78 | 62.29 |
| CDY30540 | Canola | cytosol | 94.78 | 62.29 |
| CDY51916 | Canola | cytosol | 94.78 | 62.29 |
| CDX83272 | Canola | cytosol | 92.17 | 60.57 |
| CDY04503 | Canola | cytosol | 92.17 | 60.57 |
| CDX71440 | Canola | cytosol | 91.3 | 60.0 |
| AT2G27550.1 | Thale cress | cytosol | 90.43 | 59.43 |
| CDY31183 | Canola | cytosol | 90.43 | 59.43 |
| PGSC0003DMT400018307 | Potato | cytosol | 75.65 | 58.78 |
| KRH26623 | Soybean | cytosol | 73.04 | 57.53 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 77.39 | 51.45 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 76.52 | 50.87 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 76.52 | 50.87 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 76.52 | 50.87 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 76.52 | 50.87 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 75.65 | 50.29 |
| EES16646 | Sorghum | cytosol | 75.65 | 50.29 |
| Os11t0152500-00 | Rice | cytosol | 75.65 | 50.29 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 76.52 | 50.29 |
| Os04t0411400-01 | Rice | cytosol | 74.78 | 49.71 |
| Zm00001d023420_P001 | Maize | cytosol | 74.78 | 49.71 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 74.78 | 49.43 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 74.78 | 49.14 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 74.78 | 49.14 |
| GSMUA_Achr10P... | Banana | cytosol | 73.91 | 49.13 |
| EES09271 | Sorghum | cytosol | 73.91 | 49.13 |
| GSMUA_Achr10P... | Banana | cytosol | 73.91 | 48.85 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 73.91 | 48.57 |
| Solyc06g074350.2.1 | Tomato | cytosol | 73.91 | 48.57 |
| EES12110 | Sorghum | cytosol | 73.04 | 48.55 |
| Zm00001d050649_P001 | Maize | cytosol | 73.04 | 48.55 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 73.04 | 48.55 |
| Os02t0531600-01 | Rice | cytosol | 73.04 | 48.55 |
| CDX80890 | Canola | cytosol | 73.04 | 48.28 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 73.04 | 48.0 |
| EES06907 | Sorghum | cytosol | 72.17 | 47.98 |
| Zm00001d025346_P001 | Maize | cytosol | 72.17 | 47.98 |
| TraesCSU01G202000.1 | Wheat | cytosol | 72.17 | 47.98 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 72.17 | 47.98 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 72.17 | 47.98 |
| CDY04899 | Canola | cytosol | 73.91 | 47.49 |
| CDY14173 | Canola | cytosol | 73.91 | 47.49 |
| Zm00001d052537_P001 | Maize | cytosol | 73.04 | 47.46 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 72.17 | 47.16 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 46.09 | 45.69 |
| CDY41432 | Canola | cytosol | 70.43 | 45.51 |
| CDX70281 | Canola | cytosol | 70.43 | 45.51 |
| KRH22689 | Soybean | cytosol | 62.61 | 43.37 |
| Zm00001d044705_P001 | Maize | extracellular | 75.65 | 42.23 |
| CDY16409 | Canola | cytosol | 60.0 | 39.43 |
| CDY60941 | Canola | cytosol | 60.0 | 39.43 |
| CDY07452 | Canola | cytosol | 58.26 | 38.29 |
| CDX87561 | Canola | cytosol | 57.39 | 37.29 |
| CDY02016 | Canola | cytosol | 56.52 | 37.14 |
| CDY21719 | Canola | cytosol | 53.91 | 35.84 |
| CDX81861 | Canola | cytosol | 53.91 | 35.84 |
| CDY60777 | Canola | cytosol | 53.04 | 35.06 |
| CDY26185 | Canola | cytosol | 52.17 | 34.68 |
| CDX86931 | Canola | cytosol | 58.26 | 32.37 |
| CDY00248 | Canola | cytosol | 58.26 | 32.37 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 56.52 | 32.02 |
| CDY13571 | Canola | cytosol | 55.65 | 31.68 |
| CDY65847 | Canola | cytosol | 11.3 | 9.15 |
Protein Annotations
| EnsemblPlants:CDX77127 | EnsemblPlantsGene:GSBRNA2T00127731001 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF48 | PFAM:PF01161 | ProteinID:CDX77127 | ProteinID:CDX77127.1 |
| SUPFAM:SSF49777 | UniParc:UPI0004EED154 | MapMan:27.8.1 | : | : | : |
Description
BnaC04g39220D
Coordinates
chrLK031809:+:1323491..1324353
Molecular Weight (calculated)
13351.9 Da
IEP (calculated)
7.601
GRAVY (calculated)
-0.400
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIEYVNQVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV TFGKEIVGYE MPRPNIGIHR FVYLLFKQNR RGSVVSVPSY RDQFNTRMFA YENDLGLPVA
101: AVFFNCQRET AARRR
101: AVFFNCQRET AARRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.