Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G007370.1 | |
| HORVU4Hr1G031770.1 | |
| HORVU4Hr1G043300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03840.1 | HORVU4Hr1G007370.1 | AT5G38480.1 | 23613197 |
| AT5G03840.1 | HORVU4Hr1G031770.1 | AT5G38480.1 | 23613197 |
| AT5G03840.1 | HORVU4Hr1G043300.1 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G127600.1 | Wheat | cytosol | 96.0 | 97.11 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 96.0 | 97.11 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 95.43 | 96.53 |
| Os11t0152500-00 | Rice | cytosol | 92.0 | 93.06 |
| EES16646 | Sorghum | cytosol | 91.43 | 92.49 |
| EES09271 | Sorghum | cytosol | 89.14 | 90.17 |
| Zm00001d023420_P001 | Maize | cytosol | 88.57 | 89.6 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 86.86 | 87.86 |
| Zm00001d052537_P001 | Maize | cytosol | 85.71 | 84.75 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 79.43 | 80.35 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 77.71 | 79.07 |
| Zm00001d044705_P001 | Maize | extracellular | 92.0 | 78.16 |
| CDX77127 | Canola | cytosol | 50.29 | 76.52 |
| KRG96189 | Soybean | cytosol | 74.29 | 75.14 |
| PGSC0003DMT400090526 | Potato | cytosol | 73.71 | 75.0 |
| PGSC0003DMT400018307 | Potato | cytosol | 63.43 | 75.0 |
| Solyc09g009560.1.1 | Tomato | cytosol | 73.14 | 74.42 |
| AT2G27550.1 | Thale cress | cytosol | 73.14 | 73.14 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 72.0 | 72.83 |
| CDY51916 | Canola | cytosol | 72.57 | 72.57 |
| CDY30540 | Canola | cytosol | 72.57 | 72.57 |
| CDY27416 | Canola | cytosol | 72.57 | 72.57 |
| Bra034357.1-P | Field mustard | cytosol | 72.57 | 72.57 |
| Bra000506.1-P | Field mustard | cytosol | 71.43 | 71.43 |
| Bra012010.1-P | Field mustard | cytosol | 71.43 | 71.43 |
| Solyc06g074350.2.1 | Tomato | cytosol | 71.43 | 71.43 |
| CDY04503 | Canola | cytosol | 71.43 | 71.43 |
| CDX83272 | Canola | cytosol | 71.43 | 71.43 |
| CDY31183 | Canola | cytosol | 70.86 | 70.86 |
| CDX71440 | Canola | cytosol | 70.86 | 70.86 |
| KRH26623 | Soybean | cytosol | 58.29 | 69.86 |
| KRH32734 | Soybean | cytosol | 69.14 | 69.54 |
| KRH30839 | Soybean | cytosol | 68.0 | 68.79 |
| CDX80890 | Canola | cytosol | 68.0 | 68.39 |
| Bra028815.1-P | Field mustard | cytosol | 69.71 | 68.16 |
| CDY04899 | Canola | cytosol | 69.71 | 68.16 |
| CDY14173 | Canola | cytosol | 69.71 | 68.16 |
| KRG89440 | Soybean | cytosol | 29.14 | 68.0 |
| CDY41432 | Canola | cytosol | 69.14 | 67.98 |
| Bra005783.1-P | Field mustard | cytosol | 68.57 | 67.8 |
| Bra009508.1-P | Field mustard | cytosol | 68.57 | 67.42 |
| CDX70281 | Canola | cytosol | 68.57 | 67.42 |
| AT5G03840.1 | Thale cress | cytosol | 68.0 | 67.23 |
| KRH22689 | Soybean | cytosol | 58.86 | 62.05 |
| HORVU7Hr1G024610.1 | Barley | cytosol | 60.0 | 58.66 |
| HORVU3Hr1G087100.1 | Barley | cytosol | 60.0 | 58.66 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 64.57 | 55.66 |
| HORVU3Hr1G027590.13 | Barley | cytosol | 56.57 | 55.31 |
| KRH67905 | Soybean | plastid | 74.29 | 53.5 |
| HORVU1Hr1G076430.1 | Barley | cytosol | 53.14 | 51.67 |
| HORVU2Hr1G084540.1 | Barley | cytosol | 50.86 | 51.15 |
| HORVU2Hr1G117710.1 | Barley | cytosol | 50.29 | 50.87 |
| HORVU4Hr1G090390.1 | Barley | cytosol, nucleus, peroxisome | 51.43 | 50.85 |
| HORVU4Hr1G012200.2 | Barley | cytosol | 52.0 | 50.84 |
| HORVU2Hr1G108520.1 | Barley | cytosol | 49.14 | 50.0 |
| HORVU3Hr1G002020.1 | Barley | cytosol | 48.57 | 48.85 |
| HORVU3Hr1G001000.2 | Barley | cytosol | 50.86 | 46.11 |
| HORVU2Hr1G023180.2 | Barley | cytosol | 48.57 | 45.7 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 46.29 | 45.51 |
| HORVU4Hr1G089690.1 | Barley | cytosol | 34.29 | 45.45 |
| HORVU7Hr1G046660.6 | Barley | cytosol | 46.86 | 45.05 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | UniProt:A0A287QYZ8 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003712 |
| GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:1903506 | EnsemblPlantsGene:HORVU5Hr1G042230 | EnsemblPlants:HORVU5Hr1G042230.13 |
| InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | ScanProsite:PS01220 |
| PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | InterPro:TFL1-like | UniParc:UPI000B466DC6 |
Description
No Description!
Coordinates
chrchr5H:+:322274387..322275704
Molecular Weight (calculated)
19941.8 Da
IEP (calculated)
8.703
GRAVY (calculated)
-0.327
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: NHMSRSVEPL IVGRVIGEVL DTFNPCVKMV TTYNSNKLVF NGHELYPSAV VSKPRVEVQG DGLRSLFTLV MTDPDVPGPS DPYLREHLHW FVTDIPGTTD
101: ASFGREVISY ESPKPNIGIH RFIFVLFKQK RRQTVTVPSF RDQFNTRQFA EENDLGLPVA AVYFNCQRET AARRR
101: ASFGREVISY ESPKPNIGIH RFIFVLFKQK RRQTVTVPSF RDQFNTRQFA EENDLGLPVA AVYFNCQRET AARRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.