Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010504.1-P | |
| Bra011648.1-P | |
| Bra017735.1-P | |
| Bra028187.1-P | |
| Bra028409.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70281 | Canola | cytosol | 100.0 | 100.0 |
| Bra005783.1-P | Field mustard | cytosol | 86.52 | 87.01 |
| AT5G03840.1 | Thale cress | cytosol | 85.96 | 86.44 |
| Bra028815.1-P | Field mustard | cytosol | 83.71 | 83.24 |
| Zm00001d050649_P001 | Maize | cytosol | 70.79 | 72.83 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 69.66 | 72.09 |
| KRG96189 | Soybean | cytosol | 69.66 | 71.68 |
| EES06907 | Sorghum | cytosol | 69.66 | 71.68 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 69.1 | 71.1 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 69.1 | 71.1 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 69.1 | 71.1 |
| EES16646 | Sorghum | cytosol | 69.1 | 71.1 |
| TraesCSU01G202000.1 | Wheat | cytosol | 69.1 | 71.1 |
| Os11t0152500-00 | Rice | cytosol | 69.1 | 71.1 |
| Os04t0411400-01 | Rice | cytosol | 67.98 | 69.94 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 67.98 | 69.94 |
| Os02t0531600-01 | Rice | cytosol | 67.98 | 69.94 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 67.98 | 69.94 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 67.98 | 69.94 |
| EES09271 | Sorghum | cytosol | 67.42 | 69.36 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 67.42 | 69.36 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 67.42 | 69.36 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 67.98 | 69.14 |
| PGSC0003DMT400090526 | Potato | cytosol | 66.29 | 68.6 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 67.42 | 68.57 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 67.42 | 68.57 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 67.42 | 68.57 |
| Zm00001d023420_P001 | Maize | cytosol | 66.29 | 68.21 |
| Solyc09g009560.1.1 | Tomato | cytosol | 65.73 | 68.02 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 66.29 | 67.82 |
| KRH32734 | Soybean | cytosol | 66.29 | 67.82 |
| EES12110 | Sorghum | cytosol | 65.73 | 67.63 |
| Bra034357.1-P | Field mustard | cytosol | 66.29 | 67.43 |
| KRH30839 | Soybean | cytosol | 65.17 | 67.05 |
| Zm00001d025346_P001 | Maize | cytosol | 65.17 | 67.05 |
| Bra000506.1-P | Field mustard | cytosol | 65.73 | 66.86 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 65.73 | 66.48 |
| Zm00001d052537_P001 | Maize | cytosol | 65.73 | 66.1 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 64.61 | 65.71 |
| Bra012010.1-P | Field mustard | cytosol | 64.61 | 65.71 |
| GSMUA_Achr10P... | Banana | cytosol | 63.48 | 65.32 |
| GSMUA_Achr10P... | Banana | cytosol | 63.48 | 64.94 |
| KRG89440 | Soybean | cytosol | 26.97 | 64.0 |
| Zm00001d044705_P001 | Maize | extracellular | 69.66 | 60.19 |
| Bra010052.1-P | Field mustard | cytosol | 59.55 | 59.89 |
| Bra022475.1-P | Field mustard | cytosol | 56.18 | 57.14 |
| Bra004117.1-P | Field mustard | cytosol | 53.37 | 54.29 |
| Bra015710.1-P | Field mustard | mitochondrion | 44.94 | 51.95 |
| KRH67905 | Soybean | plastid | 70.22 | 51.44 |
| Bra031016.1-P | Field mustard | cytosol | 49.44 | 50.87 |
| Bra025930.1-P | Field mustard | cytosol | 48.88 | 50.29 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 56.74 | 49.75 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | EnsemblPlantsGene:Bra009508 | EnsemblPlants:Bra009508.1 | EnsemblPlants:Bra009508.1-P | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:1903506 |
| InterPro:IPR036610 | UniProt:M4CZ61 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 |
| ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | InterPro:TFL1-like |
| UniParc:UPI00000A5714 | : | : | : | : | : |
Description
AT5G03840 (E=9e-085) TFL1, TFL-1 | TFL1 (TERMINAL FLOWER 1); phosphatidylethanolamine binding
Coordinates
chrA10:+:16963410..16964475
Molecular Weight (calculated)
20402.6 Da
IEP (calculated)
10.095
GRAVY (calculated)
-0.317
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MENMGTRVIE PLIVGRVVGD VLDNFTPTIK MNVSYNKKQV SNGHEFLPLA VSSKPRVEIH DGDLRSFFTL VMTDPDVPNP SDPFLKERLH WLVMNIPGTT
101: DATFGKEVVS YELPKPNIGI HRYVFVLFRQ KQRRVKFPSN IISRDQFNTR EFAIENDLGL PVAAVFFNAQ RETASRRR
101: DATFGKEVVS YELPKPNIGI HRYVFVLFRQ KQRRVKFPSN IISRDQFNTR EFAIENDLGL PVAAVFFNAQ RETASRRR
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.