Factsheet for Bra031016.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21719	Canola	cytosol	100.0	100.0
CDX81861	Canola	cytosol	99.42	99.42
AT1G18100.1	Thale cress	cytosol	95.95	95.95
Bra025930.1-P	Field mustard	cytosol	94.8	94.8
VIT_17s0000g02630.t01	Wine grape	cytosol	78.03	78.49
KRH41796	Soybean	cytosol	41.04	71.72
KRH60500	Soybean	endoplasmic reticulum	75.72	68.95
Solyc03g119100.1.1	Tomato	cytosol	68.79	68.79
PGSC0003DMT400014409	Potato	cytosol	68.79	68.79
GSMUA_Achr3P20880_001	Banana	cytosol	67.05	67.44
GSMUA_Achr6P09410_001	Banana	cytosol	67.05	67.44
Os06t0498800-01	Rice	cytosol, extracellular, plastid	68.21	67.05
GSMUA_AchrUn_...	Banana	cytosol	66.47	66.86
EES02614	Sorghum	cytosol	64.74	65.5
TraesCS7A01G229400.1	Wheat	cytosol, golgi	64.74	62.22
TraesCS7B01G195200.1	Wheat	cytosol	64.74	62.22
TraesCS7D01G230000.1	Wheat	cytosol	64.74	62.22
TraesCS3B01G010100.1	Wheat	cytosol	61.85	61.14
Zm00001d040113_P003	Maize	cytosol	63.01	60.56
TraesCS3B01G007400.1	Wheat	cytosol	58.96	60.35
TraesCS3A01G006600.1	Wheat	cytosol	60.69	60.0
KXG19938	Sorghum	cytosol	62.43	59.67
Os01t0111600-01	Rice	cytosol	59.54	59.2
HORVU7Hr1G046660.6	Barley	cytosol	61.27	58.24
HORVU3Hr1G001000.2	Barley	cytosol	61.85	55.44
TraesCS3D01G004100.1	Wheat	cytosol	61.27	54.64
Zm00001d037439_P001	Maize	extracellular	62.43	54.55
Zm00001d008446_P006	Maize	cytosol	64.74	53.85
Bra034357.1-P	Field mustard	cytosol	52.02	51.43
Bra012010.1-P	Field mustard	cytosol	52.02	51.43
Bra000506.1-P	Field mustard	cytosol	52.02	51.43
Bra009508.1-P	Field mustard	cytosol	50.87	49.44
Bra010052.1-P	Field mustard	cytosol	50.29	49.15
Bra005783.1-P	Field mustard	cytosol	49.71	48.59
Bra004117.1-P	Field mustard	cytosol	48.55	48.0
Bra028815.1-P	Field mustard	cytosol	49.13	47.49
Bra022475.1-P	Field mustard	cytosol	47.98	47.43
Bra015710.1-P	Field mustard	mitochondrion	39.31	44.16

Protein Annotations

EnsemblPlants:Bra031016.1	EnsemblPlants:Bra031016.1-P	EnsemblPlantsGene:Bra031016	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF42	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0002542ADD	UniProt:M4EQE5	MapMan:27.8.1	:

Description

AT1G18100 (E=1e-096) E12A11 | E12A11; phosphatidylethanolamine binding

Coordinates

chrA09:+:32926923..32928648

Molecular Weight (calculated)

19071.1 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.174

Length

173 amino acids

Sequence
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSAAVNP PKVNISGNSN ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSKG
101: KEILPYMEPR PPVGIHRYIF VLFRQNSPVG MMVQQPPSRA NFSTRMFAGH LDLGLPVATV YFNAQKEPAS RRR

Best Arabidopsis Sequence Match ( AT1G18100.1 )
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR

Arabidopsis Description

MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.