Factsheet for Bra028815.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010504.1-P
Bra011648.1-P
Bra017735.1-P
Bra028187.1-P
Bra028409.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Bra010504.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra011648.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra017735.1-P	AT4G35900.1	16099980
AT5G03840.1	Bra028187.1-P	AT5G38480.1	23613197
AT5G03840.1	Bra028409.1-P	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04899	Canola	cytosol	99.44	99.44
CDY14173	Canola	cytosol	99.44	99.44
Bra005783.1-P	Field mustard	cytosol	91.06	92.09
AT5G03840.1	Thale cress	cytosol	89.94	90.96
Bra009508.1-P	Field mustard	cytosol	83.24	83.71
KRG96189	Soybean	cytosol	74.3	76.88
VIT_08s0007g03450.t01	Wine grape	cytosol	72.63	75.58
EES16646	Sorghum	cytosol	71.51	73.99
Zm00001d050649_P001	Maize	cytosol	70.95	73.41
Os11t0152500-00	Rice	cytosol	70.95	73.41
GSMUA_Achr3P03070_001	Banana	cytosol	70.39	72.83
Solyc09g009560.1.1	Tomato	cytosol	69.83	72.67
PGSC0003DMT400090526	Potato	cytosol	69.83	72.67
Os04t0411400-01	Rice	cytosol	69.83	72.25
EES09271	Sorghum	cytosol	69.83	72.25
EES06907	Sorghum	cytosol	69.83	72.25
TraesCS5A01G128600.1	Wheat	cytosol	69.83	72.25
TraesCS5B01G127600.1	Wheat	cytosol	69.83	72.25
TraesCS5D01G136300.1	Wheat	cytosol	69.83	72.25
Os02t0531600-01	Rice	cytosol	69.27	71.68
TraesCS2D01G292000.1	Wheat	cytosol	68.72	71.1
HORVU2Hr1G072750.4	Barley	cytosol	68.72	71.1
TraesCS2B01G310700.1	Wheat	cytosol	68.72	71.1
TraesCSU01G202000.1	Wheat	cytosol	68.72	71.1
Zm00001d023420_P001	Maize	cytosol	68.72	71.1
GSMUA_Achr3P22720_001	Banana	cytosol	68.72	70.69
Os12t0152000-00	Rice	cytosol, extracellular	68.16	70.52
Bra034357.1-P	Field mustard	cytosol	68.72	70.29
Bra000506.1-P	Field mustard	cytosol	68.72	70.29
GSMUA_Achr8P07730_001	Banana	cytosol	68.16	69.71
HORVU5Hr1G042230.13	Barley	cytosol	68.16	69.71
GSMUA_Achr10P...	Banana	cytosol	67.04	69.36
KRG89440	Soybean	cytosol	29.05	69.33
Bra012010.1-P	Field mustard	cytosol	67.6	69.14
TraesCS4D01G305800.1	Wheat	cytosol	67.6	69.14
TraesCS4A01G409200.1	Wheat	cytosol	67.6	69.14
Zm00001d052537_P001	Maize	cytosol	68.16	68.93
EES12110	Sorghum	cytosol	66.48	68.79
KRH32734	Soybean	cytosol	66.48	68.39
TraesCS4B01G307600.1	Wheat	cytosol	66.48	68.0
GSMUA_Achr10P...	Banana	cytosol	65.92	67.82
Zm00001d025346_P001	Maize	cytosol	65.36	67.63
Zm00001d003804_P001	Maize	cytosol, extracellular	66.48	67.61
KRH30839	Soybean	cytosol	64.8	67.05
Zm00001d044705_P001	Maize	extracellular	72.07	62.62
Bra010052.1-P	Field mustard	cytosol	58.1	58.76
Bra022475.1-P	Field mustard	cytosol	55.87	57.14
KRH67905	Soybean	plastid	74.86	55.14
Bra004117.1-P	Field mustard	cytosol	52.51	53.71
Bra015710.1-P	Field mustard	mitochondrion	45.25	52.6
HORVU4Hr1G078770.1	Barley	cytosol	55.87	49.26
Bra031016.1-P	Field mustard	cytosol	47.49	49.13
Bra025930.1-P	Field mustard	cytosol	45.81	47.4

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	ProteinID:AAO22526	ProteinID:AAO22526.1	EMBL:AY176682	EnsemblPlantsGene:Bra028815
EnsemblPlants:Bra028815.1	EnsemblPlants:Bra028815.1-P	GO:GO:0000003	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908
GO:GO:0009910	GO:GO:0009987	GO:GO:1903506	InterPro:IPR036610	UniProt:M4EJ50	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161	ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF13
InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like	UniParc:UPI0002543035	:	:

Description

AT5G03840 (E=2e-090) TFL1, TFL-1 | TFL1 (TERMINAL FLOWER 1); phosphatidylethanolamine binding

Coordinates

chrA02:-:1929515..1930635

Molecular Weight (calculated)

20376.6 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.211

Length

179 amino acids

Sequence
(BLAST)

001: MENMGSRVIE PLIVGRVVGE VLDFFTQTIE MNVSYNKKQV CNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YEFPRPNIGI HRFVFVLFKQ KQRHVIDISP NIPSRDKFNT RKFAIEHDLG LPVAAVFFNA QRETAARRR

Best Arabidopsis Sequence Match ( AT5G03840.1 )
(BLAST)

001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR

Arabidopsis Description

TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.