Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03840.1 | KRH28841 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH76618 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH01783 | AT5G38480.1 | 23613197 |
| AT5G03840.1 | KRH46909 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46900 | Soybean | cytosol | 49.33 | 42.05 |
| KRG96189 | Soybean | cytosol | 93.33 | 40.46 |
| KRH70112 | Soybean | cytosol | 53.33 | 34.19 |
| KRH30839 | Soybean | cytosol | 73.33 | 31.79 |
| KRH32734 | Soybean | cytosol | 73.33 | 31.61 |
| Zm00001d050649_P001 | Maize | cytosol | 70.67 | 30.64 |
| Zm00001d023420_P001 | Maize | cytosol | 70.67 | 30.64 |
| EES06907 | Sorghum | cytosol | 70.67 | 30.64 |
| EES16646 | Sorghum | cytosol | 70.67 | 30.64 |
| Solyc09g009560.1.1 | Tomato | cytosol | 69.33 | 30.23 |
| PGSC0003DMT400090526 | Potato | cytosol | 69.33 | 30.23 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 69.33 | 30.06 |
| Os11t0152500-00 | Rice | cytosol | 69.33 | 30.06 |
| KRH67905 | Soybean | plastid | 97.33 | 30.04 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 69.33 | 29.71 |
| KRH22689 | Soybean | cytosol | 65.33 | 29.52 |
| EES09271 | Sorghum | cytosol | 68.0 | 29.48 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 68.0 | 29.48 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 68.0 | 29.48 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 68.0 | 29.48 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 68.0 | 29.48 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 68.0 | 29.48 |
| TraesCSU01G202000.1 | Wheat | cytosol | 68.0 | 29.48 |
| Os02t0531600-01 | Rice | cytosol | 68.0 | 29.48 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 68.0 | 29.48 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 68.0 | 29.48 |
| EES12110 | Sorghum | cytosol | 68.0 | 29.48 |
| AT5G03840.1 | Thale cress | cytosol | 69.33 | 29.38 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 68.0 | 29.31 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 68.0 | 29.14 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 66.67 | 29.07 |
| CDY14173 | Canola | cytosol | 69.33 | 29.05 |
| CDY04899 | Canola | cytosol | 69.33 | 29.05 |
| Bra028815.1-P | Field mustard | cytosol | 69.33 | 29.05 |
| Zm00001d025346_P001 | Maize | cytosol | 66.67 | 28.9 |
| Os04t0411400-01 | Rice | cytosol | 66.67 | 28.9 |
| Bra005783.1-P | Field mustard | cytosol | 68.0 | 28.81 |
| CDX80890 | Canola | cytosol | 66.67 | 28.74 |
| KRH09103 | Soybean | cytosol | 65.33 | 28.49 |
| CDY41432 | Canola | cytosol | 66.67 | 28.09 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 65.33 | 27.84 |
| GSMUA_Achr10P... | Banana | cytosol | 64.0 | 27.75 |
| KRH38557 | Soybean | cytosol | 64.0 | 27.75 |
| Zm00001d052537_P001 | Maize | cytosol | 65.33 | 27.68 |
| GSMUA_Achr10P... | Banana | cytosol | 62.67 | 27.01 |
| Bra009508.1-P | Field mustard | cytosol | 64.0 | 26.97 |
| CDX70281 | Canola | cytosol | 64.0 | 26.97 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 62.67 | 26.86 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 62.67 | 26.86 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 60.0 | 25.71 |
| Zm00001d044705_P001 | Maize | extracellular | 69.33 | 25.24 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 62.67 | 23.15 |
| KRH08453 | Soybean | cytosol | 52.0 | 22.16 |
| KRH08450 | Soybean | cytosol | 50.67 | 21.59 |
| KRH06761 | Soybean | cytosol | 49.33 | 21.14 |
| KRH06760 | Soybean | cytosol | 48.0 | 20.93 |
| KRG94768 | Soybean | cytosol | 48.0 | 20.57 |
| KRH26623 | Soybean | cytosol | 40.0 | 20.55 |
| KRG94769 | Soybean | cytosol | 46.67 | 20.35 |
| KRH46899 | Soybean | cytosol | 46.67 | 20.0 |
| KRH01789 | Soybean | cytosol | 34.67 | 19.4 |
| KRH01790 | Soybean | cytosol | 44.0 | 18.75 |
| KRH60500 | Soybean | endoplasmic reticulum | 46.67 | 18.42 |
| KRH01791 | Soybean | cytosol | 37.33 | 16.18 |
| KRH41796 | Soybean | cytosol | 17.33 | 13.13 |
| KRH45178 | Soybean | cytosol | 32.0 | 12.63 |
| KRH70116 | Soybean | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | EMBL:ACUP02012208 | EnsemblPlantsGene:GLYMA_20G023300 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:1903506 | InterPro:IPR036610 |
| UniProt:K7N0X3 | EnsemblPlants:KRG89440 | ProteinID:KRG89440 | ProteinID:KRG89440.1 | InterPro:PEBP-like_sf | InterPro:PEBP_euk |
| PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | SUPFAM:SSF49777 | InterPro:TFL1-like | UniParc:UPI00029586B0 | : |
Description
hypothetical protein
Coordinates
chr20:-:2474044..2474471
Molecular Weight (calculated)
8546.3 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.361
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MARMPLEPLI VGRVIGEVLD SFTTSTKMIV SYNKNQVYNG HELFPSTVNT KPKIMTDPDV PGPSDPYLKE HLHWY
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.