Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03840.1 | KRH28841 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH76618 | AT4G35900.1 | 16099980 |
| AT5G03840.1 | KRH01783 | AT5G38480.1 | 23613197 |
| AT5G03840.1 | KRH46909 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89440 | Soybean | cytosol | 30.04 | 97.33 |
| KRG96189 | Soybean | cytosol | 69.14 | 97.11 |
| KRH32734 | Soybean | cytosol | 58.44 | 81.61 |
| KRH30839 | Soybean | cytosol | 58.02 | 81.5 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 56.79 | 80.23 |
| Zm00001d050649_P001 | Maize | cytosol | 55.97 | 78.61 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 55.97 | 78.61 |
| EES16646 | Sorghum | cytosol | 55.97 | 78.61 |
| PGSC0003DMT400090526 | Potato | cytosol | 55.56 | 78.49 |
| Os04t0411400-01 | Rice | cytosol | 55.56 | 78.03 |
| Os11t0152500-00 | Rice | cytosol | 55.56 | 78.03 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 55.56 | 77.59 |
| EES06907 | Sorghum | cytosol | 55.14 | 77.46 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 55.14 | 77.46 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 55.14 | 77.46 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 55.14 | 77.46 |
| EES12110 | Sorghum | cytosol | 54.73 | 76.88 |
| Solyc09g009560.1.1 | Tomato | cytosol | 54.32 | 76.74 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 55.14 | 76.57 |
| EES09271 | Sorghum | cytosol | 54.32 | 76.3 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 54.32 | 76.3 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 53.91 | 75.72 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 53.91 | 75.72 |
| Os02t0531600-01 | Rice | cytosol | 53.91 | 75.72 |
| TraesCSU01G202000.1 | Wheat | cytosol | 53.91 | 75.72 |
| GSMUA_Achr10P... | Banana | cytosol | 53.91 | 75.72 |
| Zm00001d023420_P001 | Maize | cytosol | 53.91 | 75.72 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 53.5 | 75.14 |
| CDY14173 | Canola | cytosol | 55.14 | 74.86 |
| CDY04899 | Canola | cytosol | 55.14 | 74.86 |
| Bra028815.1-P | Field mustard | cytosol | 55.14 | 74.86 |
| AT5G03840.1 | Thale cress | cytosol | 54.32 | 74.58 |
| Bra005783.1-P | Field mustard | cytosol | 54.32 | 74.58 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 53.5 | 74.29 |
| Zm00001d025346_P001 | Maize | cytosol | 52.67 | 73.99 |
| KRH26623 | Soybean | cytosol | 44.44 | 73.97 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 53.5 | 73.86 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 53.09 | 73.71 |
| Zm00001d052537_P001 | Maize | cytosol | 53.5 | 73.45 |
| CDX80890 | Canola | cytosol | 52.26 | 72.99 |
| KRH09103 | Soybean | cytosol | 51.44 | 72.67 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 52.26 | 72.57 |
| GSMUA_Achr10P... | Banana | cytosol | 51.85 | 72.41 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 51.85 | 72.0 |
| CDY41432 | Canola | cytosol | 52.26 | 71.35 |
| KRH38557 | Soybean | cytosol | 50.62 | 71.1 |
| Bra009508.1-P | Field mustard | cytosol | 51.44 | 70.22 |
| CDX70281 | Canola | cytosol | 51.44 | 70.22 |
| Zm00001d044705_P001 | Maize | extracellular | 58.44 | 68.93 |
| KRH22689 | Soybean | cytosol | 46.09 | 67.47 |
| KRH08453 | Soybean | cytosol | 39.51 | 54.55 |
| KRH08450 | Soybean | cytosol | 39.51 | 54.55 |
| KRH06761 | Soybean | cytosol | 39.09 | 54.29 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 45.27 | 54.19 |
| KRH06760 | Soybean | cytosol | 37.86 | 53.49 |
| KRH70116 | Soybean | mitochondrion | 13.99 | 53.12 |
| KRG94768 | Soybean | cytosol | 37.86 | 52.57 |
| KRH41796 | Soybean | cytosol | 21.4 | 52.53 |
| KRG94769 | Soybean | cytosol | 37.04 | 52.33 |
| KRH01790 | Soybean | cytosol | 37.04 | 51.14 |
| KRH46900 | Soybean | cytosol | 18.52 | 51.14 |
| KRH46899 | Soybean | cytosol | 36.21 | 50.29 |
| KRH70112 | Soybean | cytosol | 23.87 | 49.57 |
| KRH01791 | Soybean | cytosol | 33.74 | 47.4 |
| KRH60500 | Soybean | endoplasmic reticulum | 35.39 | 45.26 |
| KRH01789 | Soybean | cytosol | 23.46 | 42.54 |
| KRH45178 | Soybean | cytosol | 28.81 | 36.84 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | UniProt:A0A0R0KM08 | EMBL:ACUP02002089 | ncoils:Coil | EnsemblPlantsGene:GLYMA_03G194700 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:1903506 | InterPro:IPR036610 | EnsemblPlants:KRH67905 |
| ProteinID:KRH67905 | ProteinID:KRH67905.1 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 |
| ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | InterPro:TFL1-like |
| TMHMM:TMhelix | UniParc:UPI0006EDD222 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:40522250..40524763
Molecular Weight (calculated)
27246.9 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.157
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MENHAPTNRN VAHCVHAIKE GSLRKAYNKN FCTSMSSHSL SSAGFIITIV FLPSLAPLPL LSSSLFLPLT MARMPLEPLI VGRVIGEVLD SFTTSTKMIV
101: SYNKNQVYNG HELFPSTVNT KPKVEIEGGD MRSFFTLIMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAT FGKELVSYEI PKPNIGIHRF VFVLFKQKRR
201: QCVTPPTSRD HFNTRKFAAE NDLALPVAAV YFNAQRETAA RRR
101: SYNKNQVYNG HELFPSTVNT KPKVEIEGGD MRSFFTLIMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAT FGKELVSYEI PKPNIGIHRF VFVLFKQKRR
201: QCVTPPTSRD HFNTRKFAAE NDLALPVAAV YFNAQRETAA RRR
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.