Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU2Hr1G072750.4 | Barley | cytosol | 98.27 | 98.27 |
TraesCSU01G202000.1 | Wheat | cytosol | 98.27 | 98.27 |
TraesCS2B01G310700.1 | Wheat | cytosol | 97.69 | 97.69 |
Os04t0411400-01 | Rice | cytosol | 89.6 | 89.6 |
TraesCS4D01G305800.1 | Wheat | cytosol | 89.6 | 88.57 |
EES12110 | Sorghum | cytosol | 86.13 | 86.13 |
Zm00001d003804_P001 | Maize | cytosol, extracellular | 86.13 | 84.66 |
Zm00001d025346_P001 | Maize | cytosol | 84.39 | 84.39 |
GSMUA_Achr3P22720_001 | Banana | cytosol | 83.81 | 83.33 |
TraesCS5D01G136300.1 | Wheat | cytosol | 82.08 | 82.08 |
GSMUA_Achr3P03070_001 | Banana | cytosol | 80.92 | 80.92 |
GSMUA_Achr10P... | Banana | cytosol | 79.77 | 79.77 |
VIT_08s0007g03450.t01 | Wine grape | cytosol | 78.61 | 79.07 |
GSMUA_Achr8P07730_001 | Banana | cytosol | 79.19 | 78.29 |
GSMUA_Achr10P... | Banana | cytosol | 78.03 | 77.59 |
KRG96189 | Soybean | cytosol | 76.88 | 76.88 |
PGSC0003DMT400090526 | Potato | cytosol | 75.72 | 76.16 |
VIT_06s0080g00290.t01 | Wine grape | cytosol | 75.72 | 75.72 |
PGSC0003DMT400018307 | Potato | cytosol | 64.16 | 75.0 |
Solyc09g009560.1.1 | Tomato | cytosol | 73.99 | 74.42 |
KRH26623 | Soybean | cytosol | 62.43 | 73.97 |
KRH32734 | Soybean | cytosol | 73.41 | 72.99 |
KRH30839 | Soybean | cytosol | 72.83 | 72.83 |
CDX77127 | Canola | cytosol | 47.98 | 72.17 |
Bra000506.1-P | Field mustard | cytosol | 72.83 | 72.0 |
AT2G27550.1 | Thale cress | cytosol | 72.83 | 72.0 |
CDX83272 | Canola | cytosol | 72.83 | 72.0 |
CDY30540 | Canola | cytosol | 72.25 | 71.43 |
CDY27416 | Canola | cytosol | 72.25 | 71.43 |
CDY51916 | Canola | cytosol | 72.25 | 71.43 |
Bra034357.1-P | Field mustard | cytosol | 72.25 | 71.43 |
CDY31183 | Canola | cytosol | 71.68 | 70.86 |
Solyc06g074350.2.1 | Tomato | cytosol | 71.68 | 70.86 |
Bra012010.1-P | Field mustard | cytosol | 71.68 | 70.86 |
CDY04503 | Canola | cytosol | 71.68 | 70.86 |
CDX71440 | Canola | cytosol | 71.1 | 70.29 |
CDX80890 | Canola | cytosol | 69.94 | 69.54 |
CDX70281 | Canola | cytosol | 71.1 | 69.1 |
Bra009508.1-P | Field mustard | cytosol | 71.1 | 69.1 |
CDY41432 | Canola | cytosol | 71.1 | 69.1 |
AT5G03840.1 | Thale cress | cytosol | 70.52 | 68.93 |
CDY14173 | Canola | cytosol | 71.1 | 68.72 |
CDY04899 | Canola | cytosol | 71.1 | 68.72 |
Bra028815.1-P | Field mustard | cytosol | 71.1 | 68.72 |
Bra005783.1-P | Field mustard | cytosol | 69.94 | 68.36 |
KRG89440 | Soybean | cytosol | 29.48 | 68.0 |
KRH22689 | Soybean | cytosol | 64.16 | 66.87 |
TraesCS7D01G111600.1 | Wheat | cytosol | 58.38 | 57.06 |
KRH67905 | Soybean | plastid | 75.72 | 53.91 |
TraesCS3D01G144500.1 | Wheat | cytosol | 54.91 | 52.78 |
TraesCS2D01G345700.1 | Wheat | cytosol | 52.6 | 52.3 |
TraesCS6D01G197100.1 | Wheat | cytosol | 51.45 | 51.15 |
TraesCS2D01G134200.1 | Wheat | cytosol | 50.29 | 50.29 |
TraesCS7D01G230000.1 | Wheat | cytosol | 52.02 | 50.0 |
TraesCS1D01G340800.1 | Wheat | cytosol | 50.87 | 49.16 |
TraesCS4D01G072300.1 | Wheat | cytosol | 50.29 | 48.6 |
TraesCS2D01G485100.1 | Wheat | cytosol | 48.55 | 48.55 |
TraesCS2D01G538000.1 | Wheat | cytosol | 42.2 | 48.03 |
TraesCS3D01G011600.1 | Wheat | cytosol | 47.98 | 47.43 |
TraesCS6D01G152500.1 | Wheat | cytosol | 49.71 | 46.99 |
TraesCS3D01G011500.1 | Wheat | cytosol | 47.4 | 46.86 |
TraesCS2D01G538100.1 | Wheat | cytosol | 46.82 | 46.82 |
TraesCS3D01G011700.1 | Wheat | cytosol | 46.82 | 46.29 |
TraesCS5D01G304400.1 | Wheat | cytosol | 46.24 | 44.94 |
TraesCS5D01G159500.1 | Wheat | cytosol | 46.24 | 44.94 |
TraesCS3D01G004100.1 | Wheat | cytosol | 49.71 | 44.33 |
Protein Annotations
EnsemblPlants:TraesCS2D01G292000.1 | EnsemblPlantsGene:TraesCS2D01G292000 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF43 | PFAM:PF01161 | ScanProsite:PS01220 |
SUPFAM:SSF49777 | TIGR:cd00866 | MapMan:27.8.1 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:373902323..373903547
Molecular Weight (calculated)
19651.4 Da
IEP (calculated)
9.412
GRAVY (calculated)
-0.383
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVLEPLII GKVIGEVIDN FNPTVKMTVT YSSNKQVFNG HEFFPSAVVS KPRIEVQGGD MRSFFTLVMT DPDVPGPSDP YLREHLHWIV SDIPGTTDAS
101: FGREVVSYES PKPNIGIHRF TFVLFQQKKR QAMNPPSTRD YFNTRRFADE NDLGLPVAAV YFNAQRETAA RRR
101: FGREVVSYES PKPNIGIHRF TFVLFQQKKR QAMNPPSTRD YFNTRRFADE NDLGLPVAAV YFNAQRETAA RRR
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.