Factsheet for Zm00001d003804_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007446_P003
Zm00001d007968_P001
Zm00001d017434_P001
Zm00001d018856_P001
Zm00001d021885_P001
Zm00001d033357_P001
Zm00001d039042_P001
Zm00001d048554_P001
Zm00001d053090_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Zm00001d007446_P003	AT5G38480.1	23613197
AT5G03840.1	Zm00001d007968_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d017434_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d018856_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d021885_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d033357_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d039042_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d048554_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d053090_P001	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025346_P001	Maize	cytosol	93.75	95.38
EES12110	Sorghum	cytosol	93.18	94.8
Os04t0411400-01	Rice	cytosol	87.5	89.02
TraesCS2B01G310700.1	Wheat	cytosol	86.36	87.86
TraesCSU01G202000.1	Wheat	cytosol	85.8	87.28
HORVU2Hr1G072750.4	Barley	cytosol	85.23	86.71
TraesCS2D01G292000.1	Wheat	cytosol	84.66	86.13
Zm00001d050649_P001	Maize	cytosol	81.82	83.24
TraesCS4D01G305800.1	Wheat	cytosol	81.25	81.71
GSMUA_Achr3P03070_001	Banana	cytosol	80.11	81.5
GSMUA_Achr3P22720_001	Banana	cytosol	79.55	80.46
TraesCS4B01G307600.1	Wheat	cytosol	79.55	80.0
TraesCS4A01G409200.1	Wheat	cytosol	79.55	80.0
GSMUA_Achr10P...	Banana	cytosol	77.84	79.19
Zm00001d023420_P001	Maize	cytosol	77.84	79.19
GSMUA_Achr8P07730_001	Banana	cytosol	77.27	77.71
Zm00001d052537_P001	Maize	cytosol	77.84	77.4
VIT_08s0007g03450.t01	Wine grape	cytosol	75.0	76.74
GSMUA_Achr10P...	Banana	cytosol	75.57	76.44
KRG96189	Soybean	cytosol	75.0	76.3
PGSC0003DMT400090526	Potato	cytosol	74.43	76.16
Solyc09g009560.1.1	Tomato	cytosol	73.86	75.58
VIT_06s0080g00290.t01	Wine grape	cytosol	72.73	73.99
PGSC0003DMT400018307	Potato	cytosol	61.93	73.65
CDY27416	Canola	cytosol	72.16	72.57
Bra034357.1-P	Field mustard	cytosol	72.16	72.57
CDY30540	Canola	cytosol	72.16	72.57
CDY51916	Canola	cytosol	72.16	72.57
CDX77127	Canola	cytosol	47.16	72.17
AT2G27550.1	Thale cress	cytosol	71.59	72.0
CDY04503	Canola	cytosol	71.59	72.0
CDX83272	Canola	cytosol	71.59	72.0
Bra000506.1-P	Field mustard	cytosol	71.59	72.0
Bra012010.1-P	Field mustard	cytosol	71.59	72.0
KRH30839	Soybean	cytosol	70.45	71.68
CDX71440	Canola	cytosol	71.02	71.43
CDY31183	Canola	cytosol	71.02	71.43
KRH32734	Soybean	cytosol	70.45	71.26
KRH26623	Soybean	cytosol	59.09	71.23
Solyc06g074350.2.1	Tomato	cytosol	69.89	70.29
CDX80890	Canola	cytosol	66.48	67.24
Zm00001d044705_P001	Maize	extracellular	78.41	66.99
CDY04899	Canola	cytosol	67.61	66.48
CDY14173	Canola	cytosol	67.61	66.48
Bra028815.1-P	Field mustard	cytosol	67.61	66.48
AT5G03840.1	Thale cress	cytosol	66.48	66.1
Bra005783.1-P	Field mustard	cytosol	66.48	66.1
Bra009508.1-P	Field mustard	cytosol	66.48	65.73
CDX70281	Canola	cytosol	66.48	65.73
CDY41432	Canola	cytosol	66.48	65.73
KRG89440	Soybean	cytosol	27.84	65.33
KRH22689	Soybean	cytosol	61.36	65.06
HORVU4Hr1G078770.1	Barley	cytosol	68.75	59.61
Zm00001d036242_P001	Maize	cytosol	58.52	58.19
Zm00001d008939_P001	Maize	cytosol	55.68	56.65
Zm00001d004630_P001	Maize	cytosol	55.68	55.37
Zm00001d017134_P001	Maize	cytosol	53.41	54.02
KRH67905	Soybean	plastid	73.86	53.5
Zm00001d040113_P003	Maize	cytosol	53.41	52.22
Zm00001d038725_P001	Maize	cytosol	34.66	52.14
Zm00001d025737_P001	Maize	cytosol	51.7	52.0
Zm00001d043461_P001	Maize	cytosol	51.7	51.41
Zm00001d010752_P001	Maize	cytosol	49.43	49.71
Zm00001d046300_P001	Maize	cytosol	52.27	49.2
Zm00001d024023_P001	Maize	cytosol	48.3	48.57
Zm00001d003226_P001	Maize	cytosol	42.05	47.74
Zm00001d016253_P001	Maize	cytosol	48.3	46.2
Zm00001d008446_P006	Maize	cytosol	51.14	43.27
Zm00001d004010_P001	Maize	cytosol	25.0	42.31
Zm00001d037439_P001	Maize	extracellular	46.59	41.41
Zm00001d006116_P001	Maize	cytosol	49.43	39.91

Protein Annotations

EMBL:EU241920	EnsemblPlants:Zm00001d003804_P001	EnsemblPlants:Zm00001d003804_T001	EnsemblPlantsGene:Zm00001d003804	EntrezGene:100127515	Gene3D:3.90.280.10
InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362
PANTHER:PTHR11362:SF43	PFAM:PF01161	ProteinID:ABX11006.1	ProteinID:ONM17743.1	ScanProsite:PS01220	SEG:seg
SUPFAM:SSF49777	UniParc:UPI0000F5287C	UniProt:A8WER6	MapMan:27.8.1	:	:

Description

phosphatidylethanolamine-binding protein4ZCN4

Coordinates

chr2:+:59926707..59928357

Molecular Weight (calculated)

19772.5 Da

IEP (calculated)

9.675

GRAVY (calculated)

-0.335

Length

176 amino acids

Sequence
(BLAST)

001: MSRALEPLVV GKVIGEVIDN FNPTVKMTVT YGSNKQVFNG HEFFPSAVLS KPRVEVQGDD MRSFFTLVMT DPDVPGPSDP YLREHIHWIV TDIPGTTDAS
101: FGRELVMYES PKPYIGIHRF VFVLFKQSSR QSARPPSSGG GRDYFNTRRF AADNNLGLPV AAVYFNAQRE TAARRR

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.