Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09271 | Sorghum | cytosol | 90.96 | 93.06 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 87.57 | 89.6 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 87.57 | 89.6 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 87.57 | 89.6 |
| Os11t0152500-00 | Rice | cytosol | 87.01 | 89.02 |
| Zm00001d023420_P001 | Maize | cytosol | 86.44 | 88.44 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 85.31 | 87.28 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 84.75 | 85.71 |
| Zm00001d050649_P001 | Maize | cytosol | 80.79 | 82.66 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 75.71 | 77.91 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 77.4 | 77.84 |
| Zm00001d025346_P001 | Maize | cytosol | 75.71 | 77.46 |
| Zm00001d044705_P001 | Maize | extracellular | 88.14 | 75.73 |
| PGSC0003DMT400018307 | Potato | cytosol | 63.28 | 75.68 |
| KRG96189 | Soybean | cytosol | 73.45 | 75.14 |
| PGSC0003DMT400090526 | Potato | cytosol | 72.88 | 75.0 |
| Solyc09g009560.1.1 | Tomato | cytosol | 72.32 | 74.42 |
| CDX77127 | Canola | cytosol | 47.46 | 73.04 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 71.19 | 72.83 |
| Solyc06g074350.2.1 | Tomato | cytosol | 71.19 | 72.0 |
| CDY30540 | Canola | cytosol | 70.06 | 70.86 |
| Bra034357.1-P | Field mustard | cytosol | 70.06 | 70.86 |
| CDY51916 | Canola | cytosol | 70.06 | 70.86 |
| CDY27416 | Canola | cytosol | 70.06 | 70.86 |
| KRH26623 | Soybean | cytosol | 58.19 | 70.55 |
| AT2G27550.1 | Thale cress | cytosol | 69.49 | 70.29 |
| KRH32734 | Soybean | cytosol | 68.93 | 70.11 |
| KRH30839 | Soybean | cytosol | 68.36 | 69.94 |
| CDX83272 | Canola | cytosol | 68.93 | 69.71 |
| CDY04503 | Canola | cytosol | 68.93 | 69.71 |
| Bra012010.1-P | Field mustard | cytosol | 68.93 | 69.71 |
| Bra000506.1-P | Field mustard | cytosol | 68.93 | 69.71 |
| CDX71440 | Canola | cytosol | 68.36 | 69.14 |
| CDY31183 | Canola | cytosol | 68.36 | 69.14 |
| CDX80890 | Canola | cytosol | 67.8 | 68.97 |
| Bra005783.1-P | Field mustard | cytosol | 68.93 | 68.93 |
| AT5G03840.1 | Thale cress | cytosol | 68.36 | 68.36 |
| CDY14173 | Canola | cytosol | 68.93 | 68.16 |
| CDY04899 | Canola | cytosol | 68.93 | 68.16 |
| Bra028815.1-P | Field mustard | cytosol | 68.93 | 68.16 |
| CDX70281 | Canola | cytosol | 66.1 | 65.73 |
| Bra009508.1-P | Field mustard | cytosol | 66.1 | 65.73 |
| CDY41432 | Canola | cytosol | 66.1 | 65.73 |
| KRG89440 | Soybean | cytosol | 27.68 | 65.33 |
| KRH22689 | Soybean | cytosol | 59.32 | 63.25 |
| Zm00001d036242_P001 | Maize | cytosol | 58.19 | 58.19 |
| Zm00001d008939_P001 | Maize | cytosol | 55.37 | 56.65 |
| KRH67905 | Soybean | plastid | 73.45 | 53.5 |
| Zm00001d004630_P001 | Maize | cytosol | 53.11 | 53.11 |
| Zm00001d043461_P001 | Maize | cytosol | 52.54 | 52.54 |
| Zm00001d017134_P001 | Maize | cytosol | 51.41 | 52.3 |
| Zm00001d040113_P003 | Maize | cytosol | 51.98 | 51.11 |
| Zm00001d010752_P001 | Maize | cytosol | 49.15 | 49.71 |
| Zm00001d024023_P001 | Maize | cytosol | 48.59 | 49.14 |
| Zm00001d025737_P001 | Maize | cytosol | 48.59 | 49.14 |
| Zm00001d038725_P001 | Maize | cytosol | 32.2 | 48.72 |
| Zm00001d046300_P001 | Maize | cytosol | 50.28 | 47.59 |
| Zm00001d016253_P001 | Maize | cytosol | 48.59 | 46.74 |
| Zm00001d004010_P001 | Maize | cytosol | 26.55 | 45.19 |
| Zm00001d008446_P006 | Maize | cytosol | 50.85 | 43.27 |
| Zm00001d003226_P001 | Maize | cytosol | 37.85 | 43.23 |
| Zm00001d037439_P001 | Maize | extracellular | 48.02 | 42.93 |
| Zm00001d006116_P001 | Maize | cytosol | 46.89 | 38.07 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | UniProt:A9LLY0 | ProteinID:ABX11008.1 | ProteinID:AQK57395.1 | EMBL:EU973159 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 |
| GO:GO:1903506 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 |
| ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF13 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | InterPro:TFL1-like |
| UniParc:UPI0000F5287E | EnsemblPlantsGene:Zm00001d052537 | EnsemblPlants:Zm00001d052537_P001 | EnsemblPlants:Zm00001d052537_T001 | : | : |
Description
phosphatidylethanolamine-binding protein6RCN1-Corn Centroradialis/TFL1-like protein
Coordinates
chr4:-:192553796..192554988
Molecular Weight (calculated)
19890.7 Da
IEP (calculated)
9.150
GRAVY (calculated)
-0.212
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSVESLVV GRVIGEVLDC FSPCVKMVVT YNSNRLVFNG HEIYPSAVVS KPRVEVQGGD LRSFFTLVMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAS
101: FGREVVSYES PRPGIGIHRF IFVLFKQKRR QQQTVAAVPS SSRDHFITRQ FAAENDLGHP VAAVYFNAQR ETAARRR
101: FGREVVSYES PRPGIGIHRF IFVLFKQKRR QQQTVAAVPS SSRDHFITRQ FAAENDLGHP VAAVYFNAQR ETAARRR
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.