Factsheet for Zm00001d044705_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007446_P003
Zm00001d007968_P001
Zm00001d017434_P001
Zm00001d018856_P001
Zm00001d021885_P001
Zm00001d033357_P001
Zm00001d039042_P001
Zm00001d048554_P001
Zm00001d053090_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Zm00001d007446_P003	AT5G38480.1	23613197
AT5G03840.1	Zm00001d007968_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d017434_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d018856_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d021885_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d033357_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d039042_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d048554_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d053090_P001	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16646	Sorghum	cytosol	83.01	98.84
Zm00001d023420_P001	Maize	cytosol	80.58	95.95
Os11t0152500-00	Rice	cytosol	79.61	94.8
TraesCS5D01G136300.1	Wheat	cytosol	79.13	94.22
TraesCS5B01G127600.1	Wheat	cytosol	79.13	94.22
TraesCS5A01G128600.1	Wheat	cytosol	79.13	94.22
HORVU5Hr1G042230.13	Barley	cytosol	78.16	92.0
Os12t0152000-00	Rice	cytosol, extracellular	76.7	91.33
Zm00001d052537_P001	Maize	cytosol	75.73	88.14
Zm00001d050649_P001	Maize	cytosol	71.84	85.55
VIT_08s0007g03450.t01	Wine grape	cytosol	68.45	81.98
Zm00001d025346_P001	Maize	cytosol	66.02	78.61
PGSC0003DMT400090526	Potato	cytosol	65.53	78.49
Zm00001d003804_P001	Maize	cytosol, extracellular	66.99	78.41
Solyc09g009560.1.1	Tomato	cytosol	65.05	77.91
KRG96189	Soybean	cytosol	65.05	77.46
PGSC0003DMT400018307	Potato	cytosol	55.34	77.03
VIT_06s0080g00290.t01	Wine grape	cytosol	63.59	75.72
CDX77127	Canola	cytosol	42.23	75.65
AT2G27550.1	Thale cress	cytosol	62.62	73.71
KRH32734	Soybean	cytosol	62.14	73.56
CDY51916	Canola	cytosol	62.14	73.14
Bra034357.1-P	Field mustard	cytosol	62.14	73.14
CDY27416	Canola	cytosol	62.14	73.14
Solyc06g074350.2.1	Tomato	cytosol	62.14	73.14
CDY30540	Canola	cytosol	62.14	73.14
KRH26623	Soybean	cytosol	51.46	72.6
Bra000506.1-P	Field mustard	cytosol	61.65	72.57
CDX83272	Canola	cytosol	61.65	72.57
CDY04503	Canola	cytosol	61.65	72.57
Bra012010.1-P	Field mustard	cytosol	61.65	72.57
KRH30839	Soybean	cytosol	60.68	72.25
CDY04899	Canola	cytosol	62.62	72.07
CDY14173	Canola	cytosol	62.62	72.07
Bra028815.1-P	Field mustard	cytosol	62.62	72.07
CDY31183	Canola	cytosol	61.16	72.0
CDX71440	Canola	cytosol	61.16	72.0
AT5G03840.1	Thale cress	cytosol	61.65	71.75
Bra005783.1-P	Field mustard	cytosol	61.65	71.75
CDX80890	Canola	cytosol	60.19	71.26
CDX70281	Canola	cytosol	60.19	69.66
Bra009508.1-P	Field mustard	cytosol	60.19	69.66
CDY41432	Canola	cytosol	60.19	69.66
KRG89440	Soybean	cytosol	25.24	69.33
KRH22689	Soybean	cytosol	52.43	65.06
Zm00001d036242_P001	Maize	cytosol	52.43	61.02
Zm00001d008939_P001	Maize	cytosol	49.51	58.96
KRH67905	Soybean	plastid	68.93	58.44
Zm00001d043461_P001	Maize	cytosol	47.09	54.8
Zm00001d004630_P001	Maize	cytosol	46.12	53.67
Zm00001d038725_P001	Maize	cytosol	29.61	52.14
Zm00001d017134_P001	Maize	cytosol	43.69	51.72
Zm00001d040113_P003	Maize	cytosol	45.15	51.67
Zm00001d010752_P001	Maize	cytosol	43.69	51.43
Zm00001d025737_P001	Maize	cytosol	42.72	50.29
Zm00001d046300_P001	Maize	cytosol	44.66	49.2
Zm00001d024023_P001	Maize	cytosol	40.29	47.43
Zm00001d016253_P001	Maize	cytosol	41.75	46.74
Zm00001d003226_P001	Maize	cytosol	33.5	44.52
Zm00001d037439_P001	Maize	extracellular	42.23	43.94
Zm00001d008446_P006	Maize	cytosol	43.69	43.27
Zm00001d004010_P001	Maize	cytosol	21.36	42.31
Zm00001d006116_P001	Maize	cytosol	41.75	39.45

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	UniProt:A0A1D6NQW3	GO:GO:0000003	GO:GO:0003674	GO:GO:0003712
GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791
GO:GO:0009908	GO:GO:0009910	GO:GO:0009987	GO:GO:1903506	InterPro:IPR036610	ProteinID:ONM42318.1
InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161	ScanProsite:PS01220	PFscan:PS51257
PANTHER:PTHR11362	PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like	UniParc:UPI0008455951
EnsemblPlantsGene:Zm00001d044705	EnsemblPlants:Zm00001d044705_P001	EnsemblPlants:Zm00001d044705_T001	:	:	:

Description

phosphatidylethanolamine-binding protein1ZCN1

Coordinates

chr3:-:235432714..235437168

Molecular Weight (calculated)

23284.0 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.128

Length

206 amino acids

Sequence
(BLAST)

001: MPNKQLTVFL SAFACSIQSE HFLCKIQIPV TPTMSRSVEP LIVGRVIGEV LDSFNPCVKM IVTYNSNKLV FNGHEIYPSA IVSKPRVEVQ GGDLRSFFTL
101: VMTDPDVPGP SDPYLREHLH WIVTDIPGTT DASFGREVIS YESPRPNIGI HRFIFVLFKQ KGRQTVTVPS FRDHFNTRQF AEENDLGLPV AAVYFNAQRE
201: TAARRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.