Factsheet for Zm00001d023420_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007446_P003
Zm00001d007968_P001
Zm00001d017434_P001
Zm00001d018856_P001
Zm00001d021885_P001
Zm00001d033357_P001
Zm00001d039042_P001
Zm00001d048554_P001
Zm00001d053090_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	Zm00001d007446_P003	AT5G38480.1	23613197
AT5G03840.1	Zm00001d007968_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d017434_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d018856_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d021885_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d033357_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d039042_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d048554_P001	AT5G38480.1	23613197
AT5G03840.1	Zm00001d053090_P001	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16646	Sorghum	cytosol	95.95	95.95
Os11t0152500-00	Rice	cytosol	91.91	91.91
TraesCS5D01G136300.1	Wheat	cytosol	91.33	91.33
TraesCS5B01G127600.1	Wheat	cytosol	91.33	91.33
TraesCS5A01G128600.1	Wheat	cytosol	91.33	91.33
Os12t0152000-00	Rice	cytosol, extracellular	91.33	91.33
HORVU5Hr1G042230.13	Barley	cytosol	89.6	88.57
Zm00001d052537_P001	Maize	cytosol	88.44	86.44
Zm00001d050649_P001	Maize	cytosol	83.24	83.24
Zm00001d044705_P001	Maize	extracellular	95.95	80.58
Zm00001d025346_P001	Maize	cytosol	78.61	78.61
VIT_08s0007g03450.t01	Wine grape	cytosol	77.46	77.91
Zm00001d003804_P001	Maize	cytosol, extracellular	79.19	77.84
PGSC0003DMT400090526	Potato	cytosol	76.3	76.74
Solyc09g009560.1.1	Tomato	cytosol	75.72	76.16
KRG96189	Soybean	cytosol	75.72	75.72
CDX77127	Canola	cytosol	49.71	74.78
VIT_06s0080g00290.t01	Wine grape	cytosol	73.99	73.99
PGSC0003DMT400018307	Potato	cytosol	63.01	73.65
AT2G27550.1	Thale cress	cytosol	73.99	73.14
Bra034357.1-P	Field mustard	cytosol	73.41	72.57
CDY27416	Canola	cytosol	73.41	72.57
CDY51916	Canola	cytosol	73.41	72.57
CDY30540	Canola	cytosol	73.41	72.57
CDY04503	Canola	cytosol	72.83	72.0
Bra000506.1-P	Field mustard	cytosol	72.83	72.0
CDX83272	Canola	cytosol	72.83	72.0
Bra012010.1-P	Field mustard	cytosol	72.83	72.0
CDY31183	Canola	cytosol	72.25	71.43
CDX71440	Canola	cytosol	72.25	71.43
KRH32734	Soybean	cytosol	71.68	71.26
KRG89440	Soybean	cytosol	30.64	70.67
Solyc06g074350.2.1	Tomato	cytosol	71.1	70.29
CDX80890	Canola	cytosol	70.52	70.11
KRH30839	Soybean	cytosol	69.94	69.94
KRH26623	Soybean	cytosol	58.96	69.86
Bra005783.1-P	Field mustard	cytosol	71.1	69.49
AT5G03840.1	Thale cress	cytosol	71.1	69.49
Bra028815.1-P	Field mustard	cytosol	71.1	68.72
CDY14173	Canola	cytosol	71.1	68.72
CDY04899	Canola	cytosol	71.1	68.72
CDX70281	Canola	cytosol	68.21	66.29
Bra009508.1-P	Field mustard	cytosol	68.21	66.29
CDY41432	Canola	cytosol	68.21	66.29
KRH22689	Soybean	cytosol	61.27	63.86
Zm00001d036242_P001	Maize	cytosol	60.69	59.32
Zm00001d008939_P001	Maize	cytosol	56.07	56.07
Zm00001d043461_P001	Maize	cytosol	55.49	54.24
KRH67905	Soybean	plastid	75.72	53.91
Zm00001d004630_P001	Maize	cytosol	54.91	53.67
Zm00001d010752_P001	Maize	cytosol	51.45	50.86
Zm00001d017134_P001	Maize	cytosol	50.87	50.57
Zm00001d040113_P003	Maize	cytosol	52.6	50.56
Zm00001d038725_P001	Maize	cytosol	34.1	50.43
Zm00001d025737_P001	Maize	cytosol	50.29	49.71
Zm00001d046300_P001	Maize	cytosol	52.02	48.13
Zm00001d024023_P001	Maize	cytosol	47.98	47.43
Zm00001d016253_P001	Maize	cytosol	47.98	45.11
Zm00001d003226_P001	Maize	cytosol	39.88	44.52
Zm00001d004010_P001	Maize	cytosol	26.01	43.27
Zm00001d037439_P001	Maize	extracellular	48.55	42.42
Zm00001d008446_P006	Maize	cytosol	50.87	42.31
Zm00001d006116_P001	Maize	cytosol	49.13	38.99

Protein Annotations

EntrezGene:100127514	MapMan:27.8.1	Gene3D:3.90.280.10	UniProt:A8WER5	ProteinID:AQK39287.1	EMBL:EU241919
GO:GO:0000003	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009910	GO:GO:0009987
GO:GO:1903506	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like
UniParc:UPI0000F5287B	EnsemblPlantsGene:Zm00001d023420	EnsemblPlants:Zm00001d023420_P001	EnsemblPlants:Zm00001d023420_T001	:	:

Description

phosphatidylethanolamine-binding protein3Protein TERMINAL FLOWER 1

Coordinates

chr10:-:5099284..5100559

Molecular Weight (calculated)

19535.4 Da

IEP (calculated)

9.056

GRAVY (calculated)

-0.203

Length

173 amino acids

Sequence
(BLAST)

001: MSRSVEPLIV GRVIGEVLDS FNPCVKMIVT YNSNKLVFNG HEIYPSAVVS KPRVAVQGGD LRSFFTLVMT DPDVPGPSDP YLREHLHWIV TDIPGTTDAS
101: FGRQIISYES PRPSIGIHRF IFVLFKQQGR QNVTVPSFRD HFNTRQFAEE NDLGLPVAAV YFNAQRETAA RRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.